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Highly conserved elements discovered in vertebrates are present in non-syntenic loci of tunicates, act as enhancers and can be transcribed during development.
Sanges R, Hadzhiev Y, Gueroult-Bellone M, Roure A, Ferg M, Meola N, Amore G, Basu S, Brown ER, De Simone M, Petrera F, Licastro D, Strähle U, Banfi S, Lemaire P, Birney E, Müller F, Stupka E. Sanges R, et al. Among authors: lemaire p. Nucleic Acids Res. 2013 Apr 1;41(6):3600-18. doi: 10.1093/nar/gkt030. Epub 2013 Feb 7. Nucleic Acids Res. 2013. PMID: 23393190 Free PMC article.
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.
Brozovic M, Dantec C, Dardaillon J, Dauga D, Faure E, Gineste M, Louis A, Naville M, Nitta KR, Piette J, Reeves W, Scornavacca C, Simion P, Vincentelli R, Bellec M, Aicha SB, Fagotto M, Guéroult-Bellone M, Haeussler M, Jacox E, Lowe EK, Mendez M, Roberge A, Stolfi A, Yokomori R, Brown CT, Cambillau C, Christiaen L, Delsuc F, Douzery E, Dumollard R, Kusakabe T, Nakai K, Nishida H, Satou Y, Swalla B, Veeman M, Volff JN, Lemaire P. Brozovic M, et al. Among authors: lemaire p. Nucleic Acids Res. 2018 Jan 4;46(D1):D718-D725. doi: 10.1093/nar/gkx1108. Nucleic Acids Res. 2018. PMID: 29149270 Free PMC article.
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.
Dardaillon J, Dauga D, Simion P, Faure E, Onuma TA, DeBiasse MB, Louis A, Nitta KR, Naville M, Besnardeau L, Reeves W, Wang K, Fagotto M, Guéroult-Bellone M, Fujiwara S, Dumollard R, Veeman M, Volff JN, Roest Crollius H, Douzery E, Ryan JF, Davidson B, Nishida H, Dantec C, Lemaire P. Dardaillon J, et al. Among authors: lemaire p. Nucleic Acids Res. 2020 Jan 8;48(D1):D668-D675. doi: 10.1093/nar/gkz955. Nucleic Acids Res. 2020. PMID: 31680137 Free PMC article.
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians.
Brozovic M, Martin C, Dantec C, Dauga D, Mendez M, Simion P, Percher M, Laporte B, Scornavacca C, Di Gregorio A, Fujiwara S, Gineste M, Lowe EK, Piette J, Racioppi C, Ristoratore F, Sasakura Y, Takatori N, Brown TC, Delsuc F, Douzery E, Gissi C, McDougall A, Nishida H, Sawada H, Swalla BJ, Yasuo H, Lemaire P. Brozovic M, et al. Among authors: lemaire p. Nucleic Acids Res. 2016 Jan 4;44(D1):D808-18. doi: 10.1093/nar/gkv966. Epub 2015 Sep 29. Nucleic Acids Res. 2016. PMID: 26420834 Free PMC article.
Transcriptional regulation of the Ciona Gsx gene in the neural plate.
Hudson C, Esposito R, Palladino A, Staiano L, Ferrier D, Faure E, Lemaire P, Yasuo H, Spagnuolo A. Hudson C, et al. Among authors: lemaire p. Dev Biol. 2019 Apr 15;448(2):88-100. doi: 10.1016/j.ydbio.2018.12.013. Epub 2018 Dec 21. Dev Biol. 2019. PMID: 30583796 Free article.
Guidelines for the nomenclature of genetic elements in tunicate genomes.
Stolfi A, Sasakura Y, Chalopin D, Satou Y, Christiaen L, Dantec C, Endo T, Naville M, Nishida H, Swalla BJ, Volff JN, Voskoboynik A, Dauga D, Lemaire P. Stolfi A, et al. Among authors: lemaire p. Genesis. 2015 Jan;53(1):1-14. doi: 10.1002/dvg.22822. Epub 2014 Oct 3. Genesis. 2015. PMID: 25220678 Free PMC article.
374 results