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ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics.
Howe DG, Bradford YM, Conlin T, Eagle AE, Fashena D, Frazer K, Knight J, Mani P, Martin R, Moxon SA, Paddock H, Pich C, Ramachandran S, Ruef BJ, Ruzicka L, Schaper K, Shao X, Singer A, Sprunger B, Van Slyke CE, Westerfield M. Howe DG, et al. Among authors: singer a. Nucleic Acids Res. 2013 Jan;41(Database issue):D854-60. doi: 10.1093/nar/gks938. Epub 2012 Oct 15. Nucleic Acids Res. 2013. PMID: 23074187 Free PMC article.
A zebrafish sox9 gene required for cartilage morphogenesis.
Yan YL, Miller CT, Nissen RM, Singer A, Liu D, Kirn A, Draper B, Willoughby J, Morcos PA, Amsterdam A, Chung BC, Westerfield M, Haffter P, Hopkins N, Kimmel C, Postlethwait JH. Yan YL, et al. Among authors: singer a. Development. 2002 Nov;129(21):5065-79. doi: 10.1242/dev.129.21.5065. Development. 2002. PMID: 12397114
The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes.
Sprague J, Bayraktaroglu L, Bradford Y, Conlin T, Dunn N, Fashena D, Frazer K, Haendel M, Howe DG, Knight J, Mani P, Moxon SA, Pich C, Ramachandran S, Schaper K, Segerdell E, Shao X, Singer A, Song P, Sprunger B, Van Slyke CE, Westerfield M. Sprague J, et al. Among authors: singer a. Nucleic Acids Res. 2008 Jan;36(Database issue):D768-72. doi: 10.1093/nar/gkm956. Epub 2007 Nov 8. Nucleic Acids Res. 2008. PMID: 17991680 Free PMC article.
ZFIN: enhancements and updates to the Zebrafish Model Organism Database.
Bradford Y, Conlin T, Dunn N, Fashena D, Frazer K, Howe DG, Knight J, Mani P, Martin R, Moxon SA, Paddock H, Pich C, Ramachandran S, Ruef BJ, Ruzicka L, Bauer Schaper H, Schaper K, Shao X, Singer A, Sprague J, Sprunger B, Van Slyke C, Westerfield M. Bradford Y, et al. Among authors: singer a. Nucleic Acids Res. 2011 Jan;39(Database issue):D822-9. doi: 10.1093/nar/gkq1077. Epub 2010 Oct 29. Nucleic Acids Res. 2011. PMID: 21036866 Free PMC article.
Data extraction, transformation, and dissemination through ZFIN.
Howe DG, Frazer K, Fashena D, Ruzicka L, Bradford Y, Ramachandran S, Ruef BJ, Van Slyke C, Singer A, Westerfield M. Howe DG, et al. Among authors: singer a. Methods Cell Biol. 2011;104:311-25. doi: 10.1016/B978-0-12-374814-0.00017-3. Methods Cell Biol. 2011. PMID: 21924170 Free PMC article.
ZFIN, The zebrafish model organism database: Updates and new directions.
Ruzicka L, Bradford YM, Frazer K, Howe DG, Paddock H, Ramachandran S, Singer A, Toro S, Van Slyke CE, Eagle AE, Fashena D, Kalita P, Knight J, Mani P, Martin R, Moxon SA, Pich C, Schaper K, Shao X, Westerfield M. Ruzicka L, et al. Among authors: singer a. Genesis. 2015 Aug;53(8):498-509. doi: 10.1002/dvg.22868. Epub 2015 Jul 8. Genesis. 2015. PMID: 26097180 Free PMC article.
A scientist's guide for submitting data to ZFIN.
Howe DG, Bradford YM, Eagle A, Fashena D, Frazer K, Kalita P, Mani P, Martin R, Moxon ST, Paddock H, Pich C, Ramachandran S, Ruzicka L, Schaper K, Shao X, Singer A, Toro S, Van Slyke C, Westerfield M. Howe DG, et al. Among authors: singer a. Methods Cell Biol. 2016;135:451-81. doi: 10.1016/bs.mcb.2016.04.010. Epub 2016 May 12. Methods Cell Biol. 2016. PMID: 27443940 Free PMC article.
The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching.
Howe DG, Bradford YM, Eagle A, Fashena D, Frazer K, Kalita P, Mani P, Martin R, Moxon ST, Paddock H, Pich C, Ramachandran S, Ruzicka L, Schaper K, Shao X, Singer A, Toro S, Van Slyke C, Westerfield M. Howe DG, et al. Among authors: singer a. Nucleic Acids Res. 2017 Jan 4;45(D1):D758-D768. doi: 10.1093/nar/gkw1116. Epub 2016 Nov 28. Nucleic Acids Res. 2017. PMID: 27899582 Free PMC article.
The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources.
Ruzicka L, Howe DG, Ramachandran S, Toro S, Van Slyke CE, Bradford YM, Eagle A, Fashena D, Frazer K, Kalita P, Mani P, Martin R, Moxon ST, Paddock H, Pich C, Schaper K, Shao X, Singer A, Westerfield M. Ruzicka L, et al. Among authors: singer a. Nucleic Acids Res. 2019 Jan 8;47(D1):D867-D873. doi: 10.1093/nar/gky1090. Nucleic Acids Res. 2019. PMID: 30407545 Free PMC article.
2,039 results