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pIRS: Profile-based Illumina pair-end reads simulator.
Hu X, Yuan J, Shi Y, Lu J, Liu B, Li Z, Chen Y, Mu D, Zhang H, Li N, Yue Z, Bai F, Li H, Fan W. Hu X, et al. Among authors: chen y. Bioinformatics. 2012 Jun 1;28(11):1533-5. doi: 10.1093/bioinformatics/bts187. Epub 2012 Apr 15. Bioinformatics. 2012. PMID: 22508794
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.
Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, Tang J, Wu G, Zhang H, Shi Y, Liu Y, Yu C, Wang B, Lu Y, Han C, Cheung DW, Yiu SM, Peng S, Xiaoqian Z, Liu G, Liao X, Li Y, Yang H, Wang J, Lam TW, Wang J. Luo R, et al. Among authors: chen y. Gigascience. 2012 Dec 27;1(1):18. doi: 10.1186/2047-217X-1-18. Gigascience. 2012. PMID: 23587118 Free PMC article.
Erratum: SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.
Luo R, Liu B, Xie Y, Li Z, Huang W, Yuan J, He G, Chen Y, Pan Q, Liu Y, Tang J, Wu G, Zhang H, Shi Y, Liu Y, Yu C, Wang B, Lu Y, Han C, Cheung DW, Yiu SM, Peng S, Xiaoqian Z, Liu G, Liao X, Li Y, Yang H, Wang J, Lam TW, Wang J. Luo R, et al. Among authors: chen y. Gigascience. 2015 Jul 8;4:30. doi: 10.1186/s13742-015-0069-2. eCollection 2015. Gigascience. 2015. PMID: 26161257 Free PMC article.
Quantitative Whole Genome Sequencing of Circulating Tumor Cells Enables Personalized Combination Therapy of Metastatic Cancer.
Gulbahce N, Magbanua MJM, Chin R, Agarwal MR, Luo X, Liu J, Hayden DM, Mao Q, Ciotlos S, Li Z, Chen Y, Chen X, Li Y, Zhang RY, Lee K, Tearle R, Park E, Drmanac S, Rugo HS, Park JW, Drmanac R, Peters BA. Gulbahce N, et al. Among authors: chen x, chen y. Cancer Res. 2017 Aug 15;77(16):4530-4541. doi: 10.1158/0008-5472.CAN-17-0688. Cancer Res. 2017. PMID: 28811315
Search for Soft Unclustered Energy Patterns in Proton-Proton Collisions at 13 TeV.
Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Hussain PS, Jeitler M, Krammer N, Li A, Liko D, Mikulec I, Schieck J, Schöfbeck R, Schwarz D, Sonawane M, Templ S, Waltenberger W, Wulz CE, Darwish MR, Janssen T, Van Mechelen P, Breugelmans N, D'Hondt J, Dansana S, De Moor A, Delcourt M, Heyen F, Lowette S, Makarenko I, Müller D, Tavernier S, Tytgat M, Van Onsem GP, Van Putte S, Vannerom D, Clerbaux B, Das AK, De Lentdecker G, Evard H, Favart L, Gianneios P, Hohov D, Jaramillo J, Khalilzadeh A, Khan FA, Lee K, Mahdavikhorrami M, Malara A, Paredes S, Shahzad MA, Thomas L, Vanden Bemden M, Vander Velde C, Vanlaer P, De Coen M, Dobur D, Gokbulut G, Hong Y, Knolle J, Lambrecht L, Marckx D, Mestdach G, Mota Amarilo K, Samalan A, Skovpen K, Van Den Bossche N, van der Linden J, Wezenbeek L, Benecke A, Bethani A, Bruno G, Caputo C, De Favereau De Jeneret J, Delaere C, Donertas IS, Giammanco A, Guzel AO, Jain S, Lemaitre V, Lidrych J, Mastrapasqua P, Tran TT, Wertz S, Alves GA, Alves Gallo Pereira M, Coelho E, Correia Silva G, Hensel C, Menezes De Oliveira T, Moraes A, Rebello Teles P, Soeiro M, Vilela Pereira A, Aldá Júnior WL, Barroso… See abstract for full author list ➔ Hayrapetyan A, et al. Among authors: chen ym, chen y. Phys Rev Lett. 2024 Nov 8;133(19):191902. doi: 10.1103/PhysRevLett.133.191902. Phys Rev Lett. 2024. PMID: 39576923
First Indication of Solar ^{8}B Neutrinos through Coherent Elastic Neutrino-Nucleus Scattering in PandaX-4T.
Bo Z, Chen W, Chen X, Chen Y, Cheng Z, Cui X, Fan Y, Fang D, Gao Z, Geng L, Giboni K, Guo X, Guo X, Guo Z, Han C, Han K, He C, He J, Huang D, Huang H, Huang J, Hou R, Hou Y, Ji X, Ji X, Ju Y, Li C, Li J, Li M, Li S, Li T, Li Z, Lin Q, Liu J, Lu C, Lu X, Luo L, Luo Y, Ma W, Ma Y, Mao Y, Meng Y, Ning X, Pang B, Qi N, Qian Z, Ren X, Shan D, Shang X, Shao X, Shen G, Shen M, Sun W, Tao Y, Wang A, Wang G, Wang H, Wang J, Wang L, Wang M, Wang Q, Wang S, Wang S, Wang W, Wang X, Wang X, Wang Z, Wei Y, Wu W, Wu Y, Xiao M, Xiao X, Xiong K, Xu Y, Yao S, Yan B, Yan X, Yang Y, Ye P, Yu C, Yuan Y, Yuan Z, Yun Y, Zeng X, Zhang M, Zhang P, Zhang S, Zhang S, Zhang T, Zhang W, Zhang Y, Zhang Y, Zhang Y, Zhao L, Zhou J, Zhou J, Zhou J, Zhou N, Zhou X, Zhou Y, Zhou Z; PandaX Collaboration. Bo Z, et al. Among authors: chen y. Phys Rev Lett. 2024 Nov 8;133(19):191001. doi: 10.1103/PhysRevLett.133.191001. Phys Rev Lett. 2024. PMID: 39576898
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