Yang B - Search Results

1

Identification of cross-linked peptides from complex samples.

Yang B, Wu YJ, Zhu M, Fan SB, Lin J, Zhang K, Li S, Chi H, Li YX, Chen HF, Luo SK, Ding YH, Wang LH, Hao Z, Xiu LY, Chen S, Ye K, He SM, Dong MQ. Yang B, et al. Nat Methods. 2012 Sep;9(9):904-6. doi: 10.1038/nmeth.2099. Epub 2012 Jul 8. Nat Methods. 2012. PMID: 22772728

2

A HUPO test sample study reveals common problems in mass spectrometry-based proteomics.

Bell AW, Deutsch EW, Au CE, Kearney RE, Beavis R, Sechi S, Nilsson T, Bergeron JJ; HUPO Test Sample Working Group. Bell AW, et al. Nat Methods. 2009 Jun;6(6):423-30. doi: 10.1038/nmeth.1333. Nat Methods. 2009. PMID: 19448641 Free PMC article.

3

pNovo: de novo peptide sequencing and identification using HCD spectra.

Chi H, Sun RX, Yang B, Song CQ, Wang LH, Liu C, Fu Y, Yuan ZF, Wang HP, He SM, Dong MQ. Chi H, et al. Among authors: yang b. J Proteome Res. 2010 May 7;9(5):2713-24. doi: 10.1021/pr100182k. J Proteome Res. 2010. PMID: 20329752 Free article.

4

Improved peptide identification for proteomic analysis based on comprehensive characterization of electron transfer dissociation spectra.

Sun RX, Dong MQ, Song CQ, Chi H, Yang B, Xiu LY, Tao L, Jing ZY, Liu C, Wang LH, Fu Y, He SM. Sun RX, et al. Among authors: yang b. J Proteome Res. 2010 Dec 3;9(12):6354-67. doi: 10.1021/pr100648r. Epub 2010 Nov 12. J Proteome Res. 2010. PMID: 20883037

5

Reconstitution and structural analysis of the yeast box H/ACA RNA-guided pseudouridine synthase.

Li S, Duan J, Li D, Yang B, Dong M, Ye K. Li S, et al. Among authors: yang b. Genes Dev. 2011 Nov 15;25(22):2409-21. doi: 10.1101/gad.175299.111. Genes Dev. 2011. PMID: 22085967 Free PMC article.

6

Phosphorylation-dependent interactions between Crb2 and Chk1 are essential for DNA damage checkpoint.

Qu M, Yang B, Tao L, Yates JR 3rd, Russell P, Dong MQ, Du LL. Qu M, et al. Among authors: yang b. PLoS Genet. 2012 Jul;8(7):e1002817. doi: 10.1371/journal.pgen.1002817. Epub 2012 Jul 5. PLoS Genet. 2012. PMID: 22792081 Free PMC article.

7

pNovo+: de novo peptide sequencing using complementary HCD and ETD tandem mass spectra.

Chi H, Chen H, He K, Wu L, Yang B, Sun RX, Liu J, Zeng WF, Song CQ, He SM, Dong MQ. Chi H, et al. Among authors: yang b. J Proteome Res. 2013 Feb 1;12(2):615-25. doi: 10.1021/pr3006843. Epub 2012 Dec 28. J Proteome Res. 2013. PMID: 23272783

8

Global analysis of fission yeast mating genes reveals new autophagy factors.

Sun LL, Li M, Suo F, Liu XM, Shen EZ, Yang B, Dong MQ, He WZ, Du LL. Sun LL, et al. Among authors: yang b. PLoS Genet. 2013;9(8):e1003715. doi: 10.1371/journal.pgen.1003715. Epub 2013 Aug 8. PLoS Genet. 2013. PMID: 23950735 Free PMC article.

9

Characterization of the Raptor/4E-BP1 interaction by chemical cross-linking coupled with mass spectrometry analysis.

Coffman K, Yang B, Lu J, Tetlow AL, Pelliccio E, Lu S, Guo DC, Tang C, Dong MQ, Tamanoi F. Coffman K, et al. Among authors: yang b. J Biol Chem. 2014 Feb 21;289(8):4723-34. doi: 10.1074/jbc.M113.482067. Epub 2014 Jan 8. J Biol Chem. 2014. PMID: 24403073 Free PMC article.

10

Mapping native disulfide bonds at a proteome scale.

Lu S, Fan SB, Yang B, Li YX, Meng JM, Wu L, Li P, Zhang K, Zhang MJ, Fu Y, Luo J, Sun RX, He SM, Dong MQ. Lu S, et al. Among authors: yang b. Nat Methods. 2015 Apr;12(4):329-31. doi: 10.1038/nmeth.3283. Epub 2015 Feb 9. Nat Methods. 2015. PMID: 25664544

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