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A hybrid approach for the automated finishing of bacterial genomes.
Bashir A, Klammer A, Robins WP, Chin CS, Webster D, Paxinos E, Hsu D, Ashby M, Wang S, Peluso P, Sebra R, Sorenson J, Bullard J, Yen J, Valdovino M, Mollova E, Luong K, Lin S, LaMay B, Joshi A, Rowe L, Frace M, Tarr CL, Turnsek M, Davis BM, Kasarskis A, Mekalanos JJ, Waldor MK, Schadt EE. Bashir A, et al. Among authors: luong k. Nat Biotechnol. 2012 Jul 1;30(7):701-707. doi: 10.1038/nbt.2288. Nat Biotechnol. 2012. PMID: 22750883 Free PMC article.
Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing.
Fang G, Munera D, Friedman DI, Mandlik A, Chao MC, Banerjee O, Feng Z, Losic B, Mahajan MC, Jabado OJ, Deikus G, Clark TA, Luong K, Murray IA, Davis BM, Keren-Paz A, Chess A, Roberts RJ, Korlach J, Turner SW, Kumar V, Waldor MK, Schadt EE. Fang G, et al. Among authors: luong k. Nat Biotechnol. 2012 Dec;30(12):1232-9. doi: 10.1038/nbt.2432. Epub 2012 Nov 8. Nat Biotechnol. 2012. PMID: 23138224 Free PMC article.
Modeling kinetic rate variation in third generation DNA sequencing data to detect putative modifications to DNA bases.
Schadt EE, Banerjee O, Fang G, Feng Z, Wong WH, Zhang X, Kislyuk A, Clark TA, Luong K, Keren-Paz A, Chess A, Kumar V, Chen-Plotkin A, Sondheimer N, Korlach J, Kasarskis A. Schadt EE, et al. Among authors: luong k. Genome Res. 2013 Jan;23(1):129-41. doi: 10.1101/gr.136739.111. Epub 2012 Oct 23. Genome Res. 2013. PMID: 23093720 Free PMC article.
Real-time DNA sequencing from single polymerase molecules.
Eid J, Fehr A, Gray J, Luong K, Lyle J, Otto G, Peluso P, Rank D, Baybayan P, Bettman B, Bibillo A, Bjornson K, Chaudhuri B, Christians F, Cicero R, Clark S, Dalal R, Dewinter A, Dixon J, Foquet M, Gaertner A, Hardenbol P, Heiner C, Hester K, Holden D, Kearns G, Kong X, Kuse R, Lacroix Y, Lin S, Lundquist P, Ma C, Marks P, Maxham M, Murphy D, Park I, Pham T, Phillips M, Roy J, Sebra R, Shen G, Sorenson J, Tomaney A, Travers K, Trulson M, Vieceli J, Wegener J, Wu D, Yang A, Zaccarin D, Zhao P, Zhong F, Korlach J, Turner S. Eid J, et al. Among authors: luong k. Science. 2009 Jan 2;323(5910):133-8. doi: 10.1126/science.1162986. Epub 2008 Nov 20. Science. 2009. PMID: 19023044
Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans.
Brotherton P, Haak W, Templeton J, Brandt G, Soubrier J, Jane Adler C, Richards SM, Der Sarkissian C, Ganslmeier R, Friederich S, Dresely V, van Oven M, Kenyon R, Van der Hoek MB, Korlach J, Luong K, Ho SYW, Quintana-Murci L, Behar DM, Meller H, Alt KW, Cooper A; Genographic Consortium. Brotherton P, et al. Among authors: luong k. Nat Commun. 2013;4:1764. doi: 10.1038/ncomms2656. Nat Commun. 2013. PMID: 23612305 Free PMC article.
166 results