Lipniacki T - Search Results

1

A computational model for early events in B cell antigen receptor signaling: analysis of the roles of Lyn and Fyn.

Barua D, Hlavacek WS, Lipniacki T. Barua D, et al. Among authors: lipniacki t. J Immunol. 2012 Jul 15;189(2):646-58. doi: 10.4049/jimmunol.1102003. Epub 2012 Jun 18. J Immunol. 2012. PMID: 22711887 Free PMC article.

2

Stochastic effects and bistability in T cell receptor signaling.

Lipniacki T, Hat B, Faeder JR, Hlavacek WS. Lipniacki T, et al. J Theor Biol. 2008 Sep 7;254(1):110-22. doi: 10.1016/j.jtbi.2008.05.001. Epub 2008 May 10. J Theor Biol. 2008. PMID: 18556025 Free PMC article.

3

Guidelines for visualizing and annotating rule-based models.

Chylek LA, Hu B, Blinov ML, Emonet T, Faeder JR, Goldstein B, Gutenkunst RN, Haugh JM, Lipniacki T, Posner RG, Yang J, Hlavacek WS. Chylek LA, et al. Among authors: lipniacki t. Mol Biosyst. 2011 Oct;7(10):2779-95. doi: 10.1039/c1mb05077j. Epub 2011 Jun 7. Mol Biosyst. 2011. PMID: 21647530 Free PMC article.

4

Computational analysis of an autophagy/translation switch based on mutual inhibition of MTORC1 and ULK1.

Szymańska P, Martin KR, MacKeigan JP, Hlavacek WS, Lipniacki T. Szymańska P, et al. Among authors: lipniacki t. PLoS One. 2015 Mar 11;10(3):e0116550. doi: 10.1371/journal.pone.0116550. eCollection 2015. PLoS One. 2015. PMID: 25761126 Free PMC article.

5

Relaxation oscillations and hierarchy of feedbacks in MAPK signaling.

Kochańczyk M, Kocieniewski P, Kozłowska E, Jaruszewicz-Błońska J, Sparta B, Pargett M, Albeck JG, Hlavacek WS, Lipniacki T. Kochańczyk M, et al. Among authors: lipniacki t. Sci Rep. 2017 Jan 3;7:38244. doi: 10.1038/srep38244. Sci Rep. 2017. PMID: 28045041 Free PMC article.

6

SPATKIN: a simulator for rule-based modeling of biomolecular site dynamics on surfaces.

Kochanczyk M, Hlavacek WS, Lipniacki T. Kochanczyk M, et al. Among authors: lipniacki t. Bioinformatics. 2017 Nov 15;33(22):3667-3669. doi: 10.1093/bioinformatics/btx456. Bioinformatics. 2017. PMID: 29036531 Free PMC article.

7

B cell activation triggered by the formation of the small receptor cluster: a computational study.

Hat B, Kazmierczak B, Lipniacki T. Hat B, et al. Among authors: lipniacki t. PLoS Comput Biol. 2011 Oct;7(10):e1002197. doi: 10.1371/journal.pcbi.1002197. Epub 2011 Oct 6. PLoS Comput Biol. 2011. PMID: 21998572 Free PMC article.

8

Mathematical model of NF-kappaB regulatory module.

Lipniacki T, Paszek P, Brasier AR, Luxon B, Kimmel M. Lipniacki T, et al. J Theor Biol. 2004 May 21;228(2):195-215. doi: 10.1016/j.jtbi.2004.01.001. J Theor Biol. 2004. PMID: 15094015

9

Stochastic effects of multiple regulators on expression profiles in eukaryotes.

Paszek P, Lipniacki T, Brasier AR, Tian B, Nowak DE, Kimmel M. Paszek P, et al. Among authors: lipniacki t. J Theor Biol. 2005 Apr 7;233(3):423-33. doi: 10.1016/j.jtbi.2004.10.023. Epub 2004 Dec 8. J Theor Biol. 2005. PMID: 15652150

10

Transcriptional stochasticity in gene expression.

Lipniacki T, Paszek P, Marciniak-Czochra A, Brasier AR, Kimmel M. Lipniacki T, et al. J Theor Biol. 2006 Jan 21;238(2):348-67. doi: 10.1016/j.jtbi.2005.05.032. Epub 2005 Jul 21. J Theor Biol. 2006. PMID: 16039671

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