Papaleo E - Search Results

1

Mechanisms of intramolecular communication in a hyperthermophilic acylaminoacyl peptidase: a molecular dynamics investigation.

Papaleo E, Renzetti G, Tiberti M. Papaleo E, et al. PLoS One. 2012;7(4):e35686. doi: 10.1371/journal.pone.0035686. Epub 2012 Apr 27. PLoS One. 2012. PMID: 22558199 Free PMC article.

2

Three-dimensional structure of the catalytic domain of the yeast beta-(1,3)-glucan transferase Gas1: a molecular modeling investigation.

Papaleo E, Fantucci P, Vai M, De Gioia L. Papaleo E, et al. J Mol Model. 2006 Jan;12(2):237-48. doi: 10.1007/s00894-005-0025-7. Epub 2005 Oct 21. J Mol Model. 2006. PMID: 16240096

3

Flexibility and enzymatic cold-adaptation: a comparative molecular dynamics investigation of the elastase family.

Papaleo E, Riccardi L, Villa C, Fantucci P, De Gioia L. Papaleo E, et al. Biochim Biophys Acta. 2006 Aug;1764(8):1397-406. doi: 10.1016/j.bbapap.2006.06.005. Epub 2006 Jul 1. Biochim Biophys Acta. 2006. PMID: 16920043

4

Molecular dynamics investigation of cyclic natriuretic peptides: dynamic properties reflect peptide activity.

Papaleo E, Russo L, Shaikh N, Cipolla L, Fantucci P, De Gioia L. Papaleo E, et al. J Mol Graph Model. 2010 Jun;28(8):834-41. doi: 10.1016/j.jmgm.2010.03.003. Epub 2010 Mar 7. J Mol Graph Model. 2010. PMID: 20347361

5

Dynamic properties of extremophilic subtilisin-like serine-proteases.

Tiberti M, Papaleo E. Tiberti M, et al. Among authors: papaleo e. J Struct Biol. 2011 Apr;174(1):69-83. doi: 10.1016/j.jsb.2011.01.006. Epub 2011 Jan 27. J Struct Biol. 2011. PMID: 21276854

6

Molecular determinants of enzyme cold adaptation: comparative structural and computational studies of cold- and warm-adapted enzymes.

Papaleo E, Tiberti M, Invernizzi G, Pasi M, Ranzani V. Papaleo E, et al. Curr Protein Pept Sci. 2011 Nov;12(7):657-83. doi: 10.2174/1389203711109070657. Curr Protein Pept Sci. 2011. PMID: 21827423 Review.

7

Molecular dynamics of mesophilic-like mutants of a cold-adapted enzyme: insights into distal effects induced by the mutations.

Papaleo E, Pasi M, Tiberti M, De Gioia L. Papaleo E, et al. PLoS One. 2011;6(9):e24214. doi: 10.1371/journal.pone.0024214. Epub 2011 Sep 7. PLoS One. 2011. PMID: 21915299 Free PMC article.

8

C-Terminal acidic domain of ubiquitin-conjugating enzymes: a multi-functional conserved intrinsically disordered domain in family 3 of E2 enzymes.

Arrigoni A, Grillo B, Vitriolo A, De Gioia L, Papaleo E. Arrigoni A, et al. Among authors: papaleo e. J Struct Biol. 2012 Jun;178(3):245-59. doi: 10.1016/j.jsb.2012.04.003. Epub 2012 Apr 13. J Struct Biol. 2012. PMID: 22507829

9

Paths of long-range communication in the E2 enzymes of family 3: a molecular dynamics investigation.

Papaleo E, Lindorff-Larsen K, De Gioia L. Papaleo E, et al. Phys Chem Chem Phys. 2012 Sep 28;14(36):12515-25. doi: 10.1039/c2cp41224a. Epub 2012 Jun 15. Phys Chem Chem Phys. 2012. PMID: 22706570

10

xPyder: a PyMOL plugin to analyze coupled residues and their networks in protein structures.

Pasi M, Tiberti M, Arrigoni A, Papaleo E. Pasi M, et al. Among authors: papaleo e. J Chem Inf Model. 2012 Jul 23;52(7):1865-74. doi: 10.1021/ci300213c. Epub 2012 Jul 5. J Chem Inf Model. 2012. PMID: 22721491

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