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Experimental and analytical tools for studying the human microbiome.
Kuczynski J, Lauber CL, Walters WA, Parfrey LW, Clemente JC, Gevers D, Knight R. Kuczynski J, et al. Among authors: walters wa. Nat Rev Genet. 2011 Dec 16;13(1):47-58. doi: 10.1038/nrg3129. Nat Rev Genet. 2011. PMID: 22179717 Free PMC article. Review.
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.
Caporaso JG, Lauber CL, Walters WA, Berg-Lyons D, Lozupone CA, Turnbaugh PJ, Fierer N, Knight R. Caporaso JG, et al. Among authors: walters wa. Proc Natl Acad Sci U S A. 2011 Mar 15;108 Suppl 1(Suppl 1):4516-22. doi: 10.1073/pnas.1000080107. Epub 2010 Jun 3. Proc Natl Acad Sci U S A. 2011. PMID: 20534432 Free PMC article.
Conducting a microbiome study.
Goodrich JK, Di Rienzi SC, Poole AC, Koren O, Walters WA, Caporaso JG, Knight R, Ley RE. Goodrich JK, et al. Among authors: walters wa. Cell. 2014 Jul 17;158(2):250-262. doi: 10.1016/j.cell.2014.06.037. Cell. 2014. PMID: 25036628 Free PMC article.
Global biogeography of highly diverse protistan communities in soil.
Bates ST, Clemente JC, Flores GE, Walters WA, Parfrey LW, Knight R, Fierer N. Bates ST, et al. Among authors: walters wa. ISME J. 2013 Mar;7(3):652-9. doi: 10.1038/ismej.2012.147. Epub 2012 Dec 13. ISME J. 2013. PMID: 23235291 Free PMC article.
QIIME allows analysis of high-throughput community sequencing data.
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R. Caporaso JG, et al. Among authors: walters wa. Nat Methods. 2010 May;7(5):335-6. doi: 10.1038/nmeth.f.303. Epub 2010 Apr 11. Nat Methods. 2010. PMID: 20383131 Free PMC article. No abstract available.
156 results