Reyes-Herrera PH - Search Results

1

miREE: miRNA recognition elements ensemble.

Reyes-Herrera PH, Ficarra E, Acquaviva A, Macii E. Reyes-Herrera PH, et al. BMC Bioinformatics. 2011 Nov 24;12:454. doi: 10.1186/1471-2105-12-454. BMC Bioinformatics. 2011. PMID: 22115078 Free PMC article.

2

One decade of development and evolution of microRNA target prediction algorithms.

Reyes-Herrera PH, Ficarra E. Reyes-Herrera PH, et al. Genomics Proteomics Bioinformatics. 2012 Oct;10(5):254-63. doi: 10.1016/j.gpb.2012.10.001. Epub 2012 Oct 23. Genomics Proteomics Bioinformatics. 2012. PMID: 23200135 Free PMC article. Review.

3

Computational Methods for CLIP-seq Data Processing.

Reyes-Herrera PH, Ficarra E. Reyes-Herrera PH, et al. Bioinform Biol Insights. 2014 Oct 1;8:199-207. doi: 10.4137/BBI.S16803. eCollection 2014. Bioinform Biol Insights. 2014. PMID: 25336930 Free PMC article. Review.

4

BackCLIP: a tool to identify common background presence in PAR-CLIP datasets.

Reyes-Herrera PH, Speck-Hernandez CA, Sierra CA, Herrera S. Reyes-Herrera PH, et al. Bioinformatics. 2015 Nov 15;31(22):3703-5. doi: 10.1093/bioinformatics/btv442. Epub 2015 Jul 29. Bioinformatics. 2015. PMID: 26227145

5

Predicting RAD-seq Marker Numbers across the Eukaryotic Tree of Life.

Herrera S, Reyes-Herrera PH, Shank TM. Herrera S, et al. Among authors: reyes herrera ph. Genome Biol Evol. 2015 Nov 3;7(12):3207-25. doi: 10.1093/gbe/evv210. Genome Biol Evol. 2015. PMID: 26537225 Free PMC article.

6

Robust and efficient software for reference-free genomic diversity analysis of genotyping-by-sequencing data on diploid and polyploid species.

Parra-Salazar A, Gomez J, Lozano-Arce D, Reyes-Herrera PH, Duitama J. Parra-Salazar A, et al. Among authors: reyes herrera ph. Mol Ecol Resour. 2022 Jan;22(1):439-454. doi: 10.1111/1755-0998.13477. Epub 2021 Jul 29. Mol Ecol Resour. 2022. PMID: 34288487

7

MultiGWAS: An integrative tool for Genome Wide Association Studies in tetraploid organisms.

Garreta L, Cerón-Souza I, Palacio MR, Reyes-Herrera PH. Garreta L, et al. Among authors: reyes herrera ph. Ecol Evol. 2021 May 12;11(12):7411-7426. doi: 10.1002/ece3.7572. eCollection 2021 Jun. Ecol Evol. 2021. PMID: 34188823 Free PMC article.

8

Inheritance of Rootstock Effects in Avocado (Persea americana Mill.) cv. Hass.

Reyes-Herrera PH, Muñoz-Baena L, Velásquez-Zapata V, Patiño L, Delgado-Paz OA, Díaz-Diez CA, Navas-Arboleda AA, Cortés AJ. Reyes-Herrera PH, et al. Front Plant Sci. 2020 Dec 23;11:555071. doi: 10.3389/fpls.2020.555071. eCollection 2020. Front Plant Sci. 2020. PMID: 33424874 Free PMC article.

9

Genome Sequence Data Reveal at Least Two Distinct Incursions of the Tropical Race 4 Variant of Fusarium Wilt into South America.

Reyes-Herrera PH, Torres-Bedoya E, Lopez-Alvarez D, Burbano-David D, Carmona SL, Bebber DP, Studholme DJ, Betancourt M, Soto-Suarez M. Reyes-Herrera PH, et al. Phytopathology. 2023 Jan;113(1):90-97. doi: 10.1094/PHYTO-01-22-0034-R. Epub 2022 Dec 14. Phytopathology. 2023. PMID: 36095335

10

Chromosome-scale genome assembly and annotation of the tetraploid potato cultivar Diacol Capiro adapted to the Andean region.

Reyes-Herrera PH, Delgadillo-Duran DA, Flores-Gonzalez M, Mueller LA, Cristancho MA, Barrero LS. Reyes-Herrera PH, et al. G3 (Bethesda). 2024 Sep 4;14(9):jkae139. doi: 10.1093/g3journal/jkae139. G3 (Bethesda). 2024. PMID: 39058924 Free PMC article.

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