Marchiori E - Search Results

1

The metagenomic basis of anammox metabolism in Candidatus 'Brocadia fulgida'.

Gori F, Tringe SG, Kartal B, Marchiori E, Jetten MS. Gori F, et al. Among authors: marchiori e. Biochem Soc Trans. 2011 Dec;39(6):1799-804. doi: 10.1042/BST20110707. Biochem Soc Trans. 2011. PMID: 22103529 Review.

2

Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes.

Gori F, Tringe SG, Folino G, van Hijum SA, Op den Camp HJ, Jetten MS, Marchiori E. Gori F, et al. Among authors: marchiori e. BMC Genomics. 2013 Jan 16;14:7. doi: 10.1186/1471-2164-14-7. BMC Genomics. 2013. PMID: 23324532 Free PMC article.

3

MTR: taxonomic annotation of short metagenomic reads using clustering at multiple taxonomic ranks.

Gori F, Folino G, Jetten MS, Marchiori E. Gori F, et al. Among authors: marchiori e. Bioinformatics. 2011 Jan 15;27(2):196-203. doi: 10.1093/bioinformatics/btq649. Epub 2010 Dec 1. Bioinformatics. 2011. PMID: 21127032 Free PMC article.

4

Class conditional nearest neighbor for large margin instance selection.

Marchiori E. Marchiori E. IEEE Trans Pattern Anal Mach Intell. 2010 Feb;32(2):364-70. doi: 10.1109/TPAMI.2009.164. IEEE Trans Pattern Anal Mach Intell. 2010. PMID: 20075464 Free article.

5

Gaussian interaction profile kernels for predicting drug-target interaction.

van Laarhoven T, Nabuurs SB, Marchiori E. van Laarhoven T, et al. Among authors: marchiori e. Bioinformatics. 2011 Nov 1;27(21):3036-43. doi: 10.1093/bioinformatics/btr500. Epub 2011 Sep 4. Bioinformatics. 2011. PMID: 21893517

6

Graph clustering with local search optimization: the resolution bias of the objective function matters most.

van Laarhoven T, Marchiori E. van Laarhoven T, et al. Among authors: marchiori e. Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Jan;87(1):012812. doi: 10.1103/PhysRevE.87.012812. Epub 2013 Jan 25. Phys Rev E Stat Nonlin Soft Matter Phys. 2013. PMID: 23410393

7

Breakpoint identification and smoothing of array comparative genomic hybridization data.

Jong K, Marchiori E, Meijer G, Vaart AV, Ylstra B. Jong K, et al. Among authors: marchiori e. Bioinformatics. 2004 Dec 12;20(18):3636-7. doi: 10.1093/bioinformatics/bth355. Epub 2004 Jun 16. Bioinformatics. 2004. PMID: 15201182

8

Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting.

Ye K, Feenstra KA, Heringa J, Ijzerman AP, Marchiori E. Ye K, et al. Among authors: marchiori e. Bioinformatics. 2008 Jan 1;24(1):18-25. doi: 10.1093/bioinformatics/btm537. Epub 2007 Nov 17. Bioinformatics. 2008. PMID: 18024975

9

A methodology for detecting the orthology signal in a PPI network at a functional complex level.

Jancura P, Mavridou E, Carrillo-de Santa Pau E, Marchiori E. Jancura P, et al. Among authors: marchiori e. BMC Bioinformatics. 2012 Jun 25;13 Suppl 10(Suppl 10):S18. doi: 10.1186/1471-2105-13-S10-S18. BMC Bioinformatics. 2012. PMID: 22759423 Free PMC article.

10

Predicting Drug-Target Interactions for New Drug Compounds Using a Weighted Nearest Neighbor Profile.

van Laarhoven T, Marchiori E. van Laarhoven T, et al. Among authors: marchiori e. PLoS One. 2013 Jun 26;8(6):e66952. doi: 10.1371/journal.pone.0066952. Print 2013. PLoS One. 2013. PMID: 23840562 Free PMC article.

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