Xu H - Search Results

1

Expression2Kinases: mRNA profiling linked to multiple upstream regulatory layers.

Chen EY, Xu H, Gordonov S, Lim MP, Perkins MH, Ma'ayan A. Chen EY, et al. Among authors: xu h. Bioinformatics. 2012 Jan 1;28(1):105-11. doi: 10.1093/bioinformatics/btr625. Epub 2011 Nov 10. Bioinformatics. 2012. PMID: 22080467 Free PMC article.

2

ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments.

Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. Lachmann A, et al. Among authors: xu h. Bioinformatics. 2010 Oct 1;26(19):2438-44. doi: 10.1093/bioinformatics/btq466. Epub 2010 Aug 13. Bioinformatics. 2010. PMID: 20709693 Free PMC article.

3

Toward a complete in silico, multi-layered embryonic stem cell regulatory network.

Xu H, Schaniel C, Lemischka IR, Ma'ayan A. Xu H, et al. Wiley Interdiscip Rev Syst Biol Med. 2010 Nov-Dec;2(6):708-33. doi: 10.1002/wsbm.93. Wiley Interdiscip Rev Syst Biol Med. 2010. PMID: 20890967 Free PMC article. Review.

4

SVM classifier to predict genes important for self-renewal and pluripotency of mouse embryonic stem cells.

Xu H, Lemischka IR, Ma'ayan A. Xu H, et al. BMC Syst Biol. 2010 Dec 21;4:173. doi: 10.1186/1752-0509-4-173. BMC Syst Biol. 2010. PMID: 21176149 Free PMC article.

5

ESCAPE: database for integrating high-content published data collected from human and mouse embryonic stem cells.

Xu H, Baroukh C, Dannenfelser R, Chen EY, Tan CM, Kou Y, Kim YE, Lemischka IR, Ma'ayan A. Xu H, et al. Database (Oxford). 2013 Jun 21;2013:bat045. doi: 10.1093/database/bat045. Print 2013. Database (Oxford). 2013. PMID: 23794736 Free PMC article.

6

Construction and validation of a regulatory network for pluripotency and self-renewal of mouse embryonic stem cells.

Xu H, Ang YS, Sevilla A, Lemischka IR, Ma'ayan A. Xu H, et al. PLoS Comput Biol. 2014 Aug 14;10(8):e1003777. doi: 10.1371/journal.pcbi.1003777. eCollection 2014 Aug. PLoS Comput Biol. 2014. PMID: 25122140 Free PMC article.

7

Oct4 links multiple epigenetic pathways to the pluripotency network.

Ding J, Xu H, Faiola F, Ma'ayan A, Wang J. Ding J, et al. Among authors: xu h. Cell Res. 2012 Jan;22(1):155-67. doi: 10.1038/cr.2011.179. Epub 2011 Nov 15. Cell Res. 2012. PMID: 22083510 Free PMC article.

8

Network- and attribute-based classifiers can prioritize genes and pathways for autism spectrum disorders and intellectual disability.

Kou Y, Betancur C, Xu H, Buxbaum JD, Ma'ayan A. Kou Y, et al. Among authors: xu h. Am J Med Genet C Semin Med Genet. 2012 May 15;160C(2):130-42. doi: 10.1002/ajmg.c.31330. Epub 2012 Apr 12. Am J Med Genet C Semin Med Genet. 2012. PMID: 22499558 Free PMC article.

9

Activation of alternate prosurvival pathways accounts for acquired sunitinib resistance in U87MG glioma xenografts.

Zhou Q, Lv H, Mazloom AR, Xu H, Ma'ayan A, Gallo JM. Zhou Q, et al. Among authors: xu h. J Pharmacol Exp Ther. 2012 Nov;343(2):509-19. doi: 10.1124/jpet.112.196097. Epub 2012 Aug 6. J Pharmacol Exp Ther. 2012. PMID: 22869928 Free PMC article.

10

An Esrrb and Nanog Cell Fate Regulatory Module Controlled by Feed Forward Loop Interactions.

Sevilla A, Papatsenko D, Mazloom AR, Xu H, Vasileva A, Unwin RD, LeRoy G, Chen EY, Garrett-Bakelman FE, Lee DF, Trinite B, Webb RL, Wang Z, Su J, Gingold J, Melnick A, Garcia BA, Whetton AD, MacArthur BD, Ma'ayan A, Lemischka IR. Sevilla A, et al. Among authors: xu h. Front Cell Dev Biol. 2021 Mar 19;9:630067. doi: 10.3389/fcell.2021.630067. eCollection 2021. Front Cell Dev Biol. 2021. PMID: 33816475 Free PMC article.

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