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Applications of the molecular dynamics flexible fitting method.
Trabuco LG, Schreiner E, Gumbart J, Hsin J, Villa E, Schulten K. Trabuco LG, et al. Among authors: villa e. J Struct Biol. 2011 Mar;173(3):420-7. doi: 10.1016/j.jsb.2010.09.024. Epub 2010 Oct 12. J Struct Biol. 2011. PMID: 20932910 Free PMC article.
Scalable molecular dynamics with NAMD.
Phillips JC, Braun R, Wang W, Gumbart J, Tajkhorshid E, Villa E, Chipot C, Skeel RD, Kalé L, Schulten K. Phillips JC, et al. Among authors: villa e. J Comput Chem. 2005 Dec;26(16):1781-802. doi: 10.1002/jcc.20289. J Comput Chem. 2005. PMID: 16222654 Free PMC article.
Molecular mechanisms of cellular mechanics.
Gao M, Sotomayor M, Villa E, Lee EH, Schulten K. Gao M, et al. Among authors: villa e. Phys Chem Chem Phys. 2006 Aug 28;8(32):3692-706. doi: 10.1039/b606019f. Epub 2006 Jul 10. Phys Chem Chem Phys. 2006. PMID: 16896432 Review.
Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis.
Villa E, Sengupta J, Trabuco LG, LeBarron J, Baxter WT, Shaikh TR, Grassucci RA, Nissen P, Ehrenberg M, Schulten K, Frank J. Villa E, et al. Proc Natl Acad Sci U S A. 2009 Jan 27;106(4):1063-8. doi: 10.1073/pnas.0811370106. Epub 2009 Jan 2. Proc Natl Acad Sci U S A. 2009. PMID: 19122150 Free PMC article.
Structural insight into nascent polypeptide chain-mediated translational stalling.
Seidelt B, Innis CA, Wilson DN, Gartmann M, Armache JP, Villa E, Trabuco LG, Becker T, Mielke T, Schulten K, Steitz TA, Beckmann R. Seidelt B, et al. Among authors: villa e. Science. 2009 Dec 4;326(5958):1412-5. doi: 10.1126/science.1177662. Epub 2009 Oct 29. Science. 2009. PMID: 19933110 Free PMC article.
864 results