Wong WC - Search Results

1

Reconstruction of gene association network reveals a transmembrane protein required for adipogenesis and targeted by PPARγ.

Bogner-Strauss JG, Prokesch A, Sanchez-Cabo F, Rieder D, Hackl H, Duszka K, Krogsdam A, Di Camillo B, Walenta E, Klatzer A, Lass A, Pinent M, Wong WC, Eisenhaber F, Trajanoski Z. Bogner-Strauss JG, et al. Among authors: wong wc. Cell Mol Life Sci. 2010 Dec;67(23):4049-64. doi: 10.1007/s00018-010-0424-5. Epub 2010 Jun 15. Cell Mol Life Sci. 2010. PMID: 20552250 Free PMC article.

2

Arxes: retrotransposed genes required for adipogenesis.

Prokesch A, Bogner-Strauss JG, Hackl H, Rieder D, Neuhold C, Walenta E, Krogsdam A, Scheideler M, Papak C, Wong WC, Vinson C, Eisenhaber F, Trajanoski Z. Prokesch A, et al. Among authors: wong wc. Nucleic Acids Res. 2011 Apr;39(8):3224-39. doi: 10.1093/nar/gkq1289. Epub 2010 Dec 21. Nucleic Acids Res. 2011. PMID: 21177646 Free PMC article.

3

Not all transmembrane helices are born equal: Towards the extension of the sequence homology concept to membrane proteins.

Wong WC, Maurer-Stroh S, Eisenhaber F. Wong WC, et al. Biol Direct. 2011 Oct 25;6:57. doi: 10.1186/1745-6150-6-57. Biol Direct. 2011. PMID: 22024092 Free PMC article.

4

More than 1,001 problems with protein domain databases: transmembrane regions, signal peptides and the issue of sequence homology.

Wong WC, Maurer-Stroh S, Eisenhaber F. Wong WC, et al. PLoS Comput Biol. 2010 Jul 29;6(7):e1000867. doi: 10.1371/journal.pcbi.1000867. PLoS Comput Biol. 2010. PMID: 20686689 Free PMC article.

5

On the necessity of dissecting sequence similarity scores into segment-specific contributions for inferring protein homology, function prediction and annotation.

Wong WC, Maurer-Stroh S, Eisenhaber B, Eisenhaber F. Wong WC, et al. BMC Bioinformatics. 2014 Jun 2;15:166. doi: 10.1186/1471-2105-15-166. BMC Bioinformatics. 2014. PMID: 24890864 Free PMC article.

6

On the necessity of different statistical treatment for Illumina BeadChip and Affymetrix GeneChip data and its significance for biological interpretation.

Wong WC, Loh M, Eisenhaber F. Wong WC, et al. Biol Direct. 2008 Jun 3;3:23. doi: 10.1186/1745-6150-3-23. Biol Direct. 2008. PMID: 18522715 Free PMC article.

7

Transmembrane helix: simple or complex.

Wong WC, Maurer-Stroh S, Schneider G, Eisenhaber F. Wong WC, et al. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W370-5. doi: 10.1093/nar/gks379. Epub 2012 May 7. Nucleic Acids Res. 2012. PMID: 22564899 Free PMC article.

8

The Janus-faced E-values of HMMER2: extreme value distribution or logistic function?

Wong WC, Maurer-Stroh S, Eisenhaber F. Wong WC, et al. J Bioinform Comput Biol. 2011 Feb;9(1):179-206. J Bioinform Comput Biol. 2011. PMID: 21328712

9

Charged residues next to transmembrane regions revisited: "Positive-inside rule" is complemented by the "negative inside depletion/outside enrichment rule".

Baker JA, Wong WC, Eisenhaber B, Warwicker J, Eisenhaber F. Baker JA, et al. Among authors: wong wc. BMC Biol. 2017 Jul 24;15(1):66. doi: 10.1186/s12915-017-0404-4. BMC Biol. 2017. PMID: 28738801 Free PMC article.

10

xHMMER3x2: Utilizing HMMER3's speed and HMMER2's sensitivity and specificity in the glocal alignment mode for improved large-scale protein domain annotation.

Yap CK, Eisenhaber B, Eisenhaber F, Wong WC. Yap CK, et al. Among authors: wong wc. Biol Direct. 2016 Nov 29;11(1):63. doi: 10.1186/s13062-016-0163-0. Biol Direct. 2016. PMID: 27894340 Free PMC article.

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