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Page 1
Alu repeat discovery and characterization within human genomes.
Hormozdiari F, Alkan C, Ventura M, Hajirasouliha I, Malig M, Hach F, Yorukoglu D, Dao P, Bakhshi M, Sahinalp SC, Eichler EE. Hormozdiari F, et al. Among authors: hajirasouliha i. Genome Res. 2011 Jun;21(6):840-9. doi: 10.1101/gr.115956.110. Epub 2010 Dec 3. Genome Res. 2011. PMID: 21131385 Free PMC article.
Mirroring co-evolving trees in the light of their topologies.
Hajirasouliha I, Schönhuth A, de Juan D, Valencia A, Sahinalp SC. Hajirasouliha I, et al. Bioinformatics. 2012 May 1;28(9):1202-8. doi: 10.1093/bioinformatics/bts109. Epub 2012 Mar 6. Bioinformatics. 2012. PMID: 22399677
smyRNA: a novel Ab initio ncRNA gene finder.
Salari R, Aksay C, Karakoc E, Unrau PJ, Hajirasouliha I, Sahinalp SC. Salari R, et al. Among authors: hajirasouliha i. PLoS One. 2009;4(5):e5433. doi: 10.1371/journal.pone.0005433. Epub 2009 May 5. PLoS One. 2009. PMID: 19415115 Free PMC article.
Biomolecular network motif counting and discovery by color coding.
Alon N, Dao P, Hajirasouliha I, Hormozdiari F, Sahinalp SC. Alon N, et al. Among authors: hajirasouliha i. Bioinformatics. 2008 Jul 1;24(13):i241-9. doi: 10.1093/bioinformatics/btn163. Bioinformatics. 2008. PMID: 18586721 Free PMC article.
The variant call format and VCFtools.
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, McVean G, Durbin R; 1000 Genomes Project Analysis Group. Danecek P, et al. Bioinformatics. 2011 Aug 1;27(15):2156-8. doi: 10.1093/bioinformatics/btr330. Epub 2011 Jun 7. Bioinformatics. 2011. PMID: 21653522 Free PMC article.
67 results