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Page 1
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer.
Pearson T, Giffard P, Beckstrom-Sternberg S, Auerbach R, Hornstra H, Tuanyok A, Price EP, Glass MB, Leadem B, Beckstrom-Sternberg JS, Allan GJ, Foster JT, Wagner DM, Okinaka RT, Sim SH, Pearson O, Wu Z, Chang J, Kaul R, Hoffmaster AR, Brettin TS, Robison RA, Mayo M, Gee JE, Tan P, Currie BJ, Keim P. Pearson T, et al. Among authors: beckstrom sternberg js. BMC Biol. 2009 Nov 18;7:78. doi: 10.1186/1741-7007-7-78. BMC Biol. 2009. PMID: 19922616 Free PMC article.
Genotyping of Brucella species using clade specific SNPs.
Foster JT, Price LB, Beckstrom-Sternberg SM, Pearson T, Brown WD, Kiesling DM, Allen CA, Liu CM, Beckstrom-Sternberg J, Roberto FF, Keim P. Foster JT, et al. BMC Microbiol. 2012 Jun 19;12:110. doi: 10.1186/1471-2180-12-110. BMC Microbiol. 2012. PMID: 22712667 Free PMC article.
Genomic islands from five strains of Burkholderia pseudomallei.
Tuanyok A, Leadem BR, Auerbach RK, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Mayo M, Wuthiekanun V, Brettin TS, Nierman WC, Peacock SJ, Currie BJ, Wagner DM, Keim P. Tuanyok A, et al. BMC Genomics. 2008 Nov 27;9:566. doi: 10.1186/1471-2164-9-566. BMC Genomics. 2008. PMID: 19038032 Free PMC article.
Whole-genome-based phylogeny and divergence of the genus Brucella.
Foster JT, Beckstrom-Sternberg SM, Pearson T, Beckstrom-Sternberg JS, Chain PS, Roberto FF, Hnath J, Brettin T, Keim P. Foster JT, et al. Among authors: beckstrom sternberg js. J Bacteriol. 2009 Apr;191(8):2864-70. doi: 10.1128/JB.01581-08. Epub 2009 Feb 6. J Bacteriol. 2009. PMID: 19201792 Free PMC article.
Phylogeography of Bacillus anthracis in the country of Georgia shows evidence of population structuring and is dissimilar to other regional genotypes.
Khmaladze E, Birdsell DN, Naumann AA, Hochhalter CB, Seymour ML, Nottingham R, Beckstrom-Sternberg SM, Beckstrom-Sternberg J, Nikolich MP, Chanturia G, Zhgenti E, Zakalashvili M, Malania L, Babuadze G, Tsertsvadze N, Abazashvili N, Kekelidze M, Tsanava S, Imnadze P, Ganz HH, Getz WM, Pearson O, Gajer P, Eppinger M, Ravel J, Wagner DM, Okinaka RT, Schupp JM, Keim P, Pearson T. Khmaladze E, et al. PLoS One. 2014 Jul 21;9(7):e102651. doi: 10.1371/journal.pone.0102651. eCollection 2014. PLoS One. 2014. PMID: 25047912 Free PMC article.
Complete genomic characterization of a pathogenic A.II strain of Francisella tularensis subspecies tularensis.
Beckstrom-Sternberg SM, Auerbach RK, Godbole S, Pearson JV, Beckstrom-Sternberg JS, Deng Z, Munk C, Kubota K, Zhou Y, Bruce D, Noronha J, Scheuermann RH, Wang A, Wei X, Wang J, Hao J, Wagner DM, Brettin TS, Brown N, Gilna P, Keim PS. Beckstrom-Sternberg SM, et al. PLoS One. 2007 Sep 26;2(9):e947. doi: 10.1371/journal.pone.0000947. PLoS One. 2007. PMID: 17895988 Free PMC article.
Phylogeography of Francisella tularensis: global expansion of a highly fit clone.
Vogler AJ, Birdsell D, Price LB, Bowers JR, Beckstrom-Sternberg SM, Auerbach RK, Beckstrom-Sternberg JS, Johansson A, Clare A, Buchhagen JL, Petersen JM, Pearson T, Vaissaire J, Dempsey MP, Foxall P, Engelthaler DM, Wagner DM, Keim P. Vogler AJ, et al. Among authors: beckstrom sternberg js. J Bacteriol. 2009 Apr;191(8):2474-84. doi: 10.1128/JB.01786-08. Epub 2009 Feb 27. J Bacteriol. 2009. PMID: 19251856 Free PMC article.
Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia.
Chanturia G, Birdsell DN, Kekelidze M, Zhgenti E, Babuadze G, Tsertsvadze N, Tsanava S, Imnadze P, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Champion MD, Sinari S, Gyuranecz M, Farlow J, Pettus AH, Kaufman EL, Busch JD, Pearson T, Foster JT, Vogler AJ, Wagner DM, Keim P. Chanturia G, et al. Among authors: beckstrom sternberg js. BMC Microbiol. 2011 Jun 17;11:139. doi: 10.1186/1471-2180-11-139. BMC Microbiol. 2011. PMID: 21682874 Free PMC article.
When outgroups fail; phylogenomics of rooting the emerging pathogen, Coxiella burnetii.
Pearson T, Hornstra HM, Sahl JW, Schaack S, Schupp JM, Beckstrom-Sternberg SM, O'Neill MW, Priestley RA, Champion MD, Beckstrom-Sternberg JS, Kersh GJ, Samuel JE, Massung RF, Keim P. Pearson T, et al. Among authors: beckstrom sternberg js. Syst Biol. 2013 Sep;62(5):752-62. doi: 10.1093/sysbio/syt038. Epub 2013 Jun 4. Syst Biol. 2013. PMID: 23736103 Free PMC article.
16 results