Selinummi J - Search Results

1

Bright field microscopy as an alternative to whole cell fluorescence in automated analysis of macrophage images.

Selinummi J, Ruusuvuori P, Podolsky I, Ozinsky A, Gold E, Yli-Harja O, Aderem A, Shmulevich I. Selinummi J, et al. PLoS One. 2009 Oct 22;4(10):e7497. doi: 10.1371/journal.pone.0007497. PLoS One. 2009. PMID: 19847301 Free PMC article.

2

Computational framework for simulating fluorescence microscope images with cell populations.

Lehmussola A, Ruusuvuori P, Selinummi J, Huttunen H, Yli-Harja O. Lehmussola A, et al. Among authors: selinummi j. IEEE Trans Med Imaging. 2007 Jul;26(7):1010-6. doi: 10.1109/TMI.2007.896925. IEEE Trans Med Imaging. 2007. PMID: 17649914

3

Software for quantification of labeled bacteria from digital microscope images by automated image analysis.

Selinummi J, Seppälä J, Yli-Harja O, Puhakka JA. Selinummi J, et al. Biotechniques. 2005 Dec;39(6):859-63. doi: 10.2144/000112018. Biotechniques. 2005. PMID: 16382904 Free article.

4

Extraction of the number of peroxisomes in yeast cells by automated image analysis.

Niemistö A, Selinummi J, Saleem R, Shmulevich I, Aitchison J, Yli-Harja O. Niemistö A, et al. Among authors: selinummi j. Conf Proc IEEE Eng Med Biol Soc. 2006;2006:2353-6. doi: 10.1109/IEMBS.2006.259890. Conf Proc IEEE Eng Med Biol Soc. 2006. PMID: 17945710

5

Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images.

Ruusuvuori P, Aijö T, Chowdhury S, Garmendia-Torres C, Selinummi J, Birbaumer M, Dudley AM, Pelkmans L, Yli-Harja O. Ruusuvuori P, et al. Among authors: selinummi j. BMC Bioinformatics. 2010 May 13;11:248. doi: 10.1186/1471-2105-11-248. BMC Bioinformatics. 2010. PMID: 20465797 Free PMC article.

6

ATF3 protects against atherosclerosis by suppressing 25-hydroxycholesterol-induced lipid body formation.

Gold ES, Ramsey SA, Sartain MJ, Selinummi J, Podolsky I, Rodriguez DJ, Moritz RL, Aderem A. Gold ES, et al. Among authors: selinummi j. J Exp Med. 2012 Apr 9;209(4):807-17. doi: 10.1084/jem.20111202. Epub 2012 Apr 2. J Exp Med. 2012. PMID: 22473958 Free PMC article.

7

Three-dimensional digital image analysis of immunostained neurons in thick tissue sections.

Selinummi J, Ruusuvuori P, Lehmussola A, Huttunen H, Yli-Harja O, Miettinen R. Selinummi J, et al. Conf Proc IEEE Eng Med Biol Soc. 2006;2006:4783-6. doi: 10.1109/IEMBS.2006.259419. Conf Proc IEEE Eng Med Biol Soc. 2006. PMID: 17946263

8

Segmentation of folds in tissue section images.

Palokangas S, Selinummi J, Yli-Harja O. Palokangas S, et al. Among authors: selinummi j. Annu Int Conf IEEE Eng Med Biol Soc. 2007;2007:5642-5. doi: 10.1109/IEMBS.2007.4353626. Annu Int Conf IEEE Eng Med Biol Soc. 2007. PMID: 18003292

9

Quantification of vesicles in differentiating human SH-SY5Y neuroblastoma cells by automated image analysis.

Selinummi J, Sarkanen JR, Niemistö A, Linne ML, Ylikomi T, Yli-Harja O, Jalonen TO. Selinummi J, et al. Neurosci Lett. 2006 Mar 27;396(2):102-7. doi: 10.1016/j.neulet.2005.11.021. Epub 2005 Dec 13. Neurosci Lett. 2006. PMID: 16356645

10

Simulating fluorescent microscope images of cell populations.

Lehmussola A, Selinummi J, Ruusuvuori P, Niemisto A, Yli-Harja O. Lehmussola A, et al. Among authors: selinummi j. Conf Proc IEEE Eng Med Biol Soc. 2005;2005:3153-6. doi: 10.1109/IEMBS.2005.1617144. Conf Proc IEEE Eng Med Biol Soc. 2005. PMID: 17282913

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