Xu M - Search Results

1

Automated multidimensional phenotypic profiling using large public microarray repositories.

Xu M, Li W, James GM, Mehan MR, Zhou XJ. Xu M, et al. Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12323-8. doi: 10.1073/pnas.0900883106. Epub 2009 Jul 9. Proc Natl Acad Sci U S A. 2009. PMID: 19590007 Free PMC article.

2

Further understanding human disease genes by comparing with housekeeping genes and other genes.

Tu Z, Wang L, Xu M, Zhou X, Chen T, Sun F. Tu Z, et al. Among authors: xu m. BMC Genomics. 2006 Feb 21;7:31. doi: 10.1186/1471-2164-7-31. BMC Genomics. 2006. PMID: 16504025 Free PMC article.

3

Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data.

Pan F, Kamath K, Zhang K, Pulapura S, Achar A, Nunez-Iglesias J, Huang Y, Yan X, Han J, Hu H, Xu M, Hu J, Zhou XJ. Pan F, et al. Among authors: xu m. Bioinformatics. 2006 Jul 1;22(13):1665-7. doi: 10.1093/bioinformatics/btl163. Epub 2006 May 3. Bioinformatics. 2006. PMID: 16672260

4

An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.

Xu M, Kao MC, Nunez-Iglesias J, Nevins JR, West M, Zhou XJ. Xu M, et al. BMC Genomics. 2008;9 Suppl 1(Suppl 1):S12. doi: 10.1186/1471-2164-9-S1-S12. BMC Genomics. 2008. PMID: 18366601 Free PMC article.

5

A stable iterative method for refining discriminative gene clusters.

Xu M, Zhu M, Zhang L. Xu M, et al. BMC Genomics. 2008 Sep 16;9 Suppl 2(Suppl 2):S18. doi: 10.1186/1471-2164-9-S2-S18. BMC Genomics. 2008. PMID: 18831783 Free PMC article.

6

Unraveling complex temporal associations in cellular systems across multiple time-series microarray datasets.

Li W, Xu M, Zhou XJ. Li W, et al. Among authors: xu m. J Biomed Inform. 2010 Aug;43(4):550-9. doi: 10.1016/j.jbi.2009.12.006. Epub 2010 Jan 18. J Biomed Inform. 2010. PMID: 20083231 Free article.

7

Smad1 and its target gene Wif1 coordinate BMP and Wnt signaling activities to regulate fetal lung development.

Xu B, Chen C, Chen H, Zheng SG, Bringas P Jr, Xu M, Zhou X, Chen D, Umans L, Zwijsen A, Shi W. Xu B, et al. Among authors: xu m. Development. 2011 Mar;138(5):925-35. doi: 10.1242/dev.062687. Epub 2011 Jan 26. Development. 2011. PMID: 21270055 Free PMC article.

8

High-throughput cryo-ET structural pattern mining by unsupervised deep iterative subtomogram clustering.

Zeng X, Kahng A, Xue L, Mahamid J, Chang YW, Xu M. Zeng X, et al. Among authors: xu m. Proc Natl Acad Sci U S A. 2023 Apr 11;120(15):e2213149120. doi: 10.1073/pnas.2213149120. Epub 2023 Apr 7. Proc Natl Acad Sci U S A. 2023. PMID: 37027429 Free PMC article.

9

A fast mathematical programming procedure for simultaneous fitting of assembly components into cryoEM density maps.

Zhang S, Vasishtan D, Xu M, Topf M, Alber F. Zhang S, et al. Among authors: xu m. Bioinformatics. 2010 Jun 15;26(12):i261-8. doi: 10.1093/bioinformatics/btq201. Bioinformatics. 2010. PMID: 20529915 Free PMC article.

10

High-throughput subtomogram alignment and classification by Fourier space constrained fast volumetric matching.

Xu M, Beck M, Alber F. Xu M, et al. J Struct Biol. 2012 May;178(2):152-64. doi: 10.1016/j.jsb.2012.02.014. Epub 2012 Mar 7. J Struct Biol. 2012. PMID: 22420977 Free PMC article.

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