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PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls.
Rozowsky J, Euskirchen G, Auerbach RK, Zhang ZD, Gibson T, Bjornson R, Carriero N, Snyder M, Gerstein MB. Rozowsky J, et al. Among authors: gerstein mb. Nat Biotechnol. 2009 Jan;27(1):66-75. doi: 10.1038/nbt.1518. Epub 2009 Jan 4. Nat Biotechnol. 2009. PMID: 19122651 Free PMC article.
Large-scale analysis of the yeast genome by transposon tagging and gene disruption.
Ross-Macdonald P, Coelho PS, Roemer T, Agarwal S, Kumar A, Jansen R, Cheung KH, Sheehan A, Symoniatis D, Umansky L, Heidtman M, Nelson FK, Iwasaki H, Hager K, Gerstein M, Miller P, Roeder GS, Snyder M. Ross-Macdonald P, et al. Nature. 1999 Nov 25;402(6760):413-8. doi: 10.1038/46558. Nature. 1999. PMID: 10586881
Analysis of yeast protein kinases using protein chips.
Zhu H, Klemic JF, Chang S, Bertone P, Casamayor A, Klemic KG, Smith D, Gerstein M, Reed MA, Snyder M. Zhu H, et al. Nat Genet. 2000 Nov;26(3):283-9. doi: 10.1038/81576. Nat Genet. 2000. PMID: 11062466
An integrated approach for finding overlooked genes in yeast.
Kumar A, Harrison PM, Cheung KH, Lan N, Echols N, Bertone P, Miller P, Gerstein MB, Snyder M. Kumar A, et al. Among authors: gerstein mb. Nat Biotechnol. 2002 Jan;20(1):58-63. doi: 10.1038/nbt0102-58. Nat Biotechnol. 2002. PMID: 11753363
Subcellular localization of the yeast proteome.
Kumar A, Agarwal S, Heyman JA, Matson S, Heidtman M, Piccirillo S, Umansky L, Drawid A, Jansen R, Liu Y, Cheung KH, Miller P, Gerstein M, Roeder GS, Snyder M. Kumar A, et al. Genes Dev. 2002 Mar 15;16(6):707-19. doi: 10.1101/gad.970902. Genes Dev. 2002. PMID: 11914276 Free PMC article.
YMD: a microarray database for large-scale gene expression analysis.
Cheung KH, White K, Hager J, Gerstein M, Reinke V, Nelson K, Masiar P, Srivastava R, Li Y, Li J, Zhao H, Li J, Allison DB, Snyder M, Miller P, Williams K. Cheung KH, et al. Proc AMIA Symp. 2002:140-4. Proc AMIA Symp. 2002. PMID: 12463803 Free PMC article.
655 results