Alam I - Search Results

1

Comparative genome analysis of filamentous fungi reveals gene family expansions associated with fungal pathogenesis.

Soanes DM, Alam I, Cornell M, Wong HM, Hedeler C, Paton NW, Rattray M, Hubbard SJ, Oliver SG, Talbot NJ. Soanes DM, et al. Among authors: alam i. PLoS One. 2008 Jun 4;3(6):e2300. doi: 10.1371/journal.pone.0002300. PLoS One. 2008. PMID: 18523684 Free PMC article.

2

Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the fungi.

Cornell MJ, Alam I, Soanes DM, Wong HM, Hedeler C, Paton NW, Rattray M, Hubbard SJ, Talbot NJ, Oliver SG. Cornell MJ, et al. Among authors: alam i. Genome Res. 2007 Dec;17(12):1809-22. doi: 10.1101/gr.6531807. Epub 2007 Nov 5. Genome Res. 2007. PMID: 17984228 Free PMC article.

3

e-Fungi: a data resource for comparative analysis of fungal genomes.

Hedeler C, Wong HM, Cornell MJ, Alam I, Soanes DM, Rattray M, Hubbard SJ, Talbot NJ, Oliver SG, Paton NW. Hedeler C, et al. Among authors: alam i. BMC Genomics. 2007 Nov 20;8:426. doi: 10.1186/1471-2164-8-426. BMC Genomics. 2007. PMID: 18028535 Free PMC article.

4

A kingdom-specific protein domain HMM library for improved annotation of fungal genomes.

Alam I, Hubbard SJ, Oliver SG, Rattray M. Alam I, et al. BMC Genomics. 2007 Apr 10;8:97. doi: 10.1186/1471-2164-8-97. BMC Genomics. 2007. PMID: 17425790 Free PMC article.

5

Role of the Hog1 stress-activated protein kinase in the global transcriptional response to stress in the fungal pathogen Candida albicans.

Enjalbert B, Smith DA, Cornell MJ, Alam I, Nicholls S, Brown AJ, Quinn J. Enjalbert B, et al. Among authors: alam i. Mol Biol Cell. 2006 Feb;17(2):1018-32. doi: 10.1091/mbc.e05-06-0501. Epub 2005 Dec 7. Mol Biol Cell. 2006. PMID: 16339080 Free PMC article.

6

BEACON: automated tool for Bacterial GEnome Annotation ComparisON.

Kalkatawi M, Alam I, Bajic VB. Kalkatawi M, et al. Among authors: alam i. BMC Genomics. 2015 Aug 18;16(1):616. doi: 10.1186/s12864-015-1826-4. BMC Genomics. 2015. PMID: 26283419 Free PMC article.

7

INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles.

Alam I, Antunes A, Kamau AA, Ba Alawi W, Kalkatawi M, Stingl U, Bajic VB. Alam I, et al. PLoS One. 2013 Dec 6;8(12):e82210. doi: 10.1371/journal.pone.0082210. eCollection 2013. PLoS One. 2013. PMID: 24324765 Free PMC article.

8

Genome wide survey, evolution and expression analysis of PHD finger genes reveal their diverse roles during the development and abiotic stress responses in Brassica rapa L.

Alam I, Liu CC, Ge HL, Batool K, Yang YQ, Lu YH. Alam I, et al. BMC Genomics. 2019 Oct 24;20(1):773. doi: 10.1186/s12864-019-6080-8. BMC Genomics. 2019. PMID: 31651238 Free PMC article.

9

KAUST Metagenomic Analysis Platform (KMAP), enabling access to massive analytics of re-annotated metagenomic data.

Alam I, Kamau AA, Ngugi DK, Gojobori T, Duarte CM, Bajic VB. Alam I, et al. Sci Rep. 2021 Jun 1;11(1):11511. doi: 10.1038/s41598-021-90799-y. Sci Rep. 2021. PMID: 34075103 Free PMC article.

10

First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea.

Antunes A, Alam I, Simões MF, Daniels C, Ferreira AJ, Siam R, El-Dorry H, Bajic VB. Antunes A, et al. Among authors: alam i. Genomics Proteomics Bioinformatics. 2015 Oct;13(5):304-9. doi: 10.1016/j.gpb.2015.06.004. Epub 2015 Oct 31. Genomics Proteomics Bioinformatics. 2015. PMID: 26529193 Free PMC article.

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