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The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution.
Nakayama K, Yamashita A, Kurokawa K, Morimoto T, Ogawa M, Fukuhara M, Urakami H, Ohnishi M, Uchiyama I, Ogura Y, Ooka T, Oshima K, Tamura A, Hattori M, Hayashi T. Nakayama K, et al. Among authors: ooka t. DNA Res. 2008 Aug;15(4):185-99. doi: 10.1093/dnares/dsn011. Epub 2008 May 28. DNA Res. 2008. PMID: 18508905 Free PMC article.
Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the Whole Genome PCR scanning.
Ogura Y, Kurokawa K, Ooka T, Tashiro K, Tobe T, Ohnishi M, Nakayama K, Morimoto T, Terajima J, Watanabe H, Kuhara S, Hayashi T. Ogura Y, et al. Among authors: ooka t. DNA Res. 2006 Feb 28;13(1):3-14. doi: 10.1093/dnares/dsi026. Epub 2006 Feb 22. DNA Res. 2006. PMID: 16766508 Free article.
Characterization of tccP2 carried by atypical enteropathogenic Escherichia coli.
Ooka T, Vieira MA, Ogura Y, Beutin L, La Ragione R, van Diemen PM, Stevens MP, Aktan I, Cawthraw S, Best A, Hernandes RT, Krause G, Gomes TA, Hayashi T, Frankel G. Ooka T, et al. FEMS Microbiol Lett. 2007 Jun;271(1):126-35. doi: 10.1111/j.1574-6968.2007.00707.x. Epub 2007 Apr 17. FEMS Microbiol Lett. 2007. PMID: 17403050 Free article.
TccP2-mediated subversion of actin dynamics by EPEC 2 - a distinct evolutionary lineage of enteropathogenic Escherichia coli.
Whale AD, Hernandes RT, Ooka T, Beutin L, Schüller S, Garmendia J, Crowther L, Vieira MAM, Ogura Y, Krause G, Phillips AD, Gomes TAT, Hayashi T, Frankel G. Whale AD, et al. Among authors: ooka t. Microbiology (Reading). 2007 Jun;153(Pt 6):1743-1755. doi: 10.1099/mic.0.2006/004325-0. Microbiology (Reading). 2007. PMID: 17526832 Free PMC article.
Systematic identification and sequence analysis of the genomic islands of the enteropathogenic Escherichia coli strain B171-8 by the combined use of whole-genome PCR scanning and fosmid mapping.
Ogura Y, Abe H, Katsura K, Kurokawa K, Asadulghani M, Iguchi A, Ooka T, Nakayama K, Yamashita A, Hattori M, Tobe T, Hayashi T. Ogura Y, et al. Among authors: ooka t. J Bacteriol. 2008 Nov;190(21):6948-60. doi: 10.1128/JB.00625-08. Epub 2008 Aug 29. J Bacteriol. 2008. PMID: 18757547 Free PMC article.
Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69.
Iguchi A, Thomson NR, Ogura Y, Saunders D, Ooka T, Henderson IR, Harris D, Asadulghani M, Kurokawa K, Dean P, Kenny B, Quail MA, Thurston S, Dougan G, Hayashi T, Parkhill J, Frankel G. Iguchi A, et al. Among authors: ooka t. J Bacteriol. 2009 Jan;191(1):347-54. doi: 10.1128/JB.01238-08. Epub 2008 Oct 24. J Bacteriol. 2009. PMID: 18952797 Free PMC article.
324 results