Hamady M - Search Results

1

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex.

Hamady M, Walker JJ, Harris JK, Gold NJ, Knight R. Hamady M, et al. Nat Methods. 2008 Mar;5(3):235-7. doi: 10.1038/nmeth.1184. Epub 2008 Feb 10. Nat Methods. 2008. PMID: 18264105 Free PMC article.

2

Short pyrosequencing reads suffice for accurate microbial community analysis.

Liu Z, Lozupone C, Hamady M, Bushman FD, Knight R. Liu Z, et al. Among authors: hamady m. Nucleic Acids Res. 2007;35(18):e120. doi: 10.1093/nar/gkm541. Epub 2007 Sep 18. Nucleic Acids Res. 2007. PMID: 17881377 Free PMC article.

3

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges.

Hamady M, Knight R. Hamady M, et al. Genome Res. 2009 Jul;19(7):1141-52. doi: 10.1101/gr.085464.108. Epub 2009 Apr 21. Genome Res. 2009. PMID: 19383763 Free PMC article. Review.

4

UniFrac--an online tool for comparing microbial community diversity in a phylogenetic context.

Lozupone C, Hamady M, Knight R. Lozupone C, et al. Among authors: hamady m. BMC Bioinformatics. 2006 Aug 7;7:371. doi: 10.1186/1471-2105-7-371. BMC Bioinformatics. 2006. PMID: 16893466 Free PMC article.

5

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities.

Lozupone CA, Hamady M, Kelley ST, Knight R. Lozupone CA, et al. Among authors: hamady m. Appl Environ Microbiol. 2007 Mar;73(5):1576-85. doi: 10.1128/AEM.01996-06. Epub 2007 Jan 12. Appl Environ Microbiol. 2007. PMID: 17220268 Free PMC article.

6

Worlds within worlds: evolution of the vertebrate gut microbiota.

Ley RE, Lozupone CA, Hamady M, Knight R, Gordon JI. Ley RE, et al. Among authors: hamady m. Nat Rev Microbiol. 2008 Oct;6(10):776-88. doi: 10.1038/nrmicro1978. Nat Rev Microbiol. 2008. PMID: 18794915 Free PMC article. Review.

7

A core gut microbiome in obese and lean twins.

Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI. Turnbaugh PJ, et al. Among authors: hamady m. Nature. 2009 Jan 22;457(7228):480-4. doi: 10.1038/nature07540. Epub 2008 Nov 30. Nature. 2009. PMID: 19043404 Free PMC article.

8

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses.

Jones RT, Robeson MS, Lauber CL, Hamady M, Knight R, Fierer N. Jones RT, et al. Among authors: hamady m. ISME J. 2009 Apr;3(4):442-53. doi: 10.1038/ismej.2008.127. Epub 2009 Jan 8. ISME J. 2009. PMID: 19129864 Free PMC article.

9

Characterization of airborne microbial communities at a high-elevation site and their potential to act as atmospheric ice nuclei.

Bowers RM, Lauber CL, Wiedinmyer C, Hamady M, Hallar AG, Fall R, Knight R, Fierer N. Bowers RM, et al. Among authors: hamady m. Appl Environ Microbiol. 2009 Aug;75(15):5121-30. doi: 10.1128/AEM.00447-09. Epub 2009 Jun 5. Appl Environ Microbiol. 2009. PMID: 19502432 Free PMC article.

10

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale.

Lauber CL, Hamady M, Knight R, Fierer N. Lauber CL, et al. Among authors: hamady m. Appl Environ Microbiol. 2009 Aug;75(15):5111-20. doi: 10.1128/AEM.00335-09. Epub 2009 Jun 5. Appl Environ Microbiol. 2009. PMID: 19502440 Free PMC article.

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