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427 results

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Page 1
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus.
Kettler GC, Martiny AC, Huang K, Zucker J, Coleman ML, Rodrigue S, Chen F, Lapidus A, Ferriera S, Johnson J, Steglich C, Church GM, Richardson P, Chisholm SW. Kettler GC, et al. Among authors: lapidus a. PLoS Genet. 2007 Dec;3(12):e231. doi: 10.1371/journal.pgen.0030231. PLoS Genet. 2007. PMID: 18159947 Free PMC article.
The genomic basis of trophic strategy in marine bacteria.
Lauro FM, McDougald D, Thomas T, Williams TJ, Egan S, Rice S, DeMaere MZ, Ting L, Ertan H, Johnson J, Ferriera S, Lapidus A, Anderson I, Kyrpides N, Munk AC, Detter C, Han CS, Brown MV, Robb FT, Kjelleberg S, Cavicchioli R. Lauro FM, et al. Among authors: lapidus a. Proc Natl Acad Sci U S A. 2009 Sep 15;106(37):15527-33. doi: 10.1073/pnas.0903507106. Epub 2009 Sep 8. Proc Natl Acad Sci U S A. 2009. PMID: 19805210 Free PMC article.
The Wolbachia genome of Brugia malayi: endosymbiont evolution within a human pathogenic nematode.
Foster J, Ganatra M, Kamal I, Ware J, Makarova K, Ivanova N, Bhattacharyya A, Kapatral V, Kumar S, Posfai J, Vincze T, Ingram J, Moran L, Lapidus A, Omelchenko M, Kyrpides N, Ghedin E, Wang S, Goltsman E, Joukov V, Ostrovskaya O, Tsukerman K, Mazur M, Comb D, Koonin E, Slatko B. Foster J, et al. Among authors: lapidus a. PLoS Biol. 2005 Apr;3(4):e121. doi: 10.1371/journal.pbio.0030121. Epub 2005 Mar 29. PLoS Biol. 2005. PMID: 15780005 Free PMC article.
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000.
Feil H, Feil WS, Chain P, Larimer F, DiBartolo G, Copeland A, Lykidis A, Trong S, Nolan M, Goltsman E, Thiel J, Malfatti S, Loper JE, Lapidus A, Detter JC, Land M, Richardson PM, Kyrpides NC, Ivanova N, Lindow SE. Feil H, et al. Among authors: lapidus a. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):11064-9. doi: 10.1073/pnas.0504930102. Epub 2005 Jul 25. Proc Natl Acad Sci U S A. 2005. PMID: 16043691 Free PMC article.
Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity.
Lapidus A, Goltsman E, Auger S, Galleron N, Ségurens B, Dossat C, Land ML, Broussolle V, Brillard J, Guinebretiere MH, Sanchis V, Nguen-The C, Lereclus D, Richardson P, Wincker P, Weissenbach J, Ehrlich SD, Sorokin A. Lapidus A, et al. Chem Biol Interact. 2008 Jan 30;171(2):236-49. doi: 10.1016/j.cbi.2007.03.003. Epub 2007 Mar 12. Chem Biol Interact. 2008. PMID: 17434157
Use of simulated data sets to evaluate the fidelity of metagenomic processing methods.
Mavromatis K, Ivanova N, Barry K, Shapiro H, Goltsman E, McHardy AC, Rigoutsos I, Salamov A, Korzeniewski F, Land M, Lapidus A, Grigoriev I, Richardson P, Hugenholtz P, Kyrpides NC. Mavromatis K, et al. Among authors: lapidus a. Nat Methods. 2007 Jun;4(6):495-500. doi: 10.1038/nmeth1043. Epub 2007 Apr 29. Nat Methods. 2007. PMID: 17468765 Free article.
Deinococcus geothermalis: the pool of extreme radiation resistance genes shrinks.
Makarova KS, Omelchenko MV, Gaidamakova EK, Matrosova VY, Vasilenko A, Zhai M, Lapidus A, Copeland A, Kim E, Land M, Mavrommatis K, Pitluck S, Richardson PM, Detter C, Brettin T, Saunders E, Lai B, Ravel B, Kemner KM, Wolf YI, Sorokin A, Gerasimova AV, Gelfand MS, Fredrickson JK, Koonin EV, Daly MJ. Makarova KS, et al. Among authors: lapidus a. PLoS One. 2007 Sep 26;2(9):e955. doi: 10.1371/journal.pone.0000955. PLoS One. 2007. PMID: 17895995 Free PMC article.
A korarchaeal genome reveals insights into the evolution of the Archaea.
Elkins JG, Podar M, Graham DE, Makarova KS, Wolf Y, Randau L, Hedlund BP, Brochier-Armanet C, Kunin V, Anderson I, Lapidus A, Goltsman E, Barry K, Koonin EV, Hugenholtz P, Kyrpides N, Wanner G, Richardson P, Keller M, Stetter KO. Elkins JG, et al. Among authors: lapidus a. Proc Natl Acad Sci U S A. 2008 Jun 10;105(23):8102-7. doi: 10.1073/pnas.0801980105. Epub 2008 Jun 5. Proc Natl Acad Sci U S A. 2008. PMID: 18535141 Free PMC article.
427 results