Hardison RC - Search Results

1

28-way vertebrate alignment and conservation track in the UCSC Genome Browser.

Miller W, Rosenbloom K, Hardison RC, Hou M, Taylor J, Raney B, Burhans R, King DC, Baertsch R, Blankenberg D, Kosakovsky Pond SL, Nekrutenko A, Giardine B, Harris RS, Tyekucheva S, Diekhans M, Pringle TH, Murphy WJ, Lesk A, Weinstock GM, Lindblad-Toh K, Gibbs RA, Lander ES, Siepel A, Haussler D, Kent WJ. Miller W, et al. Among authors: hardison rc. Genome Res. 2007 Dec;17(12):1797-808. doi: 10.1101/gr.6761107. Epub 2007 Nov 5. Genome Res. 2007. PMID: 17984227 Free PMC article.

2

The 5' ends of LINE1 repeats in rabbit DNA define subfamilies and reveal a short sequence conserved between rabbits and humans.

Price DK, Ayres JA, Pasqualone D, Cabell CH, Miller W, Hardison RC. Price DK, et al. Among authors: hardison rc. Genomics. 1992 Oct;14(2):320-31. doi: 10.1016/s0888-7543(05)80222-8. Genomics. 1992. PMID: 1427848

3

Software tools for analyzing pairwise alignments of long sequences.

Schwartz S, Miller W, Yang CM, Hardison RC. Schwartz S, et al. Among authors: hardison rc. Nucleic Acids Res. 1991 Sep 11;19(17):4663-7. doi: 10.1093/nar/19.17.4663. Nucleic Acids Res. 1991. PMID: 1891357 Free PMC article.

4

Sequence and comparative analysis of the rabbit alpha-like globin gene cluster reveals a rapid mode of evolution in a G + C-rich region of mammalian genomes.

Hardison R, Krane D, Vandenbergh D, Cheng JF, Mansberger J, Taddie J, Schwartz S, Huang XQ, Miller W. Hardison R, et al. J Mol Biol. 1991 Nov 20;222(2):233-49. doi: 10.1016/0022-2836(91)90209-o. J Mol Biol. 1991. PMID: 1960725

5

A space-efficient algorithm for local similarities.

Huang XQ, Hardison RC, Miller W. Huang XQ, et al. Among authors: hardison rc. Comput Appl Biosci. 1990 Oct;6(4):373-81. doi: 10.1093/bioinformatics/6.4.373. Comput Appl Biosci. 1990. PMID: 2257499

6

Globin gene server: a prototype E-mail database server featuring extensive multiple alignments and data compilation for electronic genetic analysis.

Hardison R, Chao KM, Schwartz S, Stojanovic N, Ganetsky M, Miller W. Hardison R, et al. Genomics. 1994 May 15;21(2):344-53. doi: 10.1006/geno.1994.1275. Genomics. 1994. PMID: 8088828

7

Positive and negative regulatory elements of the rabbit embryonic epsilon-globin gene revealed by an improved multiple alignment program and functional analysis.

Hardison R, Chao KM, Adamkiewicz M, Price D, Jackson J, Zeigler T, Stojanovic N, Miller W. Hardison R, et al. DNA Seq. 1993;4(3):163-76. doi: 10.3109/10425179309015629. DNA Seq. 1993. PMID: 8161819

8

Constrained sequence alignment.

Chao KM, Hardison RC, Miller W. Chao KM, et al. Among authors: hardison rc. Bull Math Biol. 1993 May;55(3):503-24. doi: 10.1007/BF02460648. Bull Math Biol. 1993. PMID: 8298508

9

Use of long sequence alignments to study the evolution and regulation of mammalian globin gene clusters.

Hardison R, Miller W. Hardison R, et al. Mol Biol Evol. 1993 Jan;10(1):73-102. doi: 10.1093/oxfordjournals.molbev.a039991. Mol Biol Evol. 1993. PMID: 8383794 Review.

10

Locating well-conserved regions within a pairwise alignment.

Chao KM, Hardison RC, Miller W. Chao KM, et al. Among authors: hardison rc. Comput Appl Biosci. 1993 Aug;9(4):387-96. doi: 10.1093/bioinformatics/9.4.387. Comput Appl Biosci. 1993. PMID: 8402204

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