Kim TK - Search Results

1

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells.

Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, Lee W, Mendenhall E, O'Donovan A, Presser A, Russ C, Xie X, Meissner A, Wernig M, Jaenisch R, Nusbaum C, Lander ES, Bernstein BE. Mikkelsen TS, et al. Among authors: kim tk. Nature. 2007 Aug 2;448(7153):553-60. doi: 10.1038/nature06008. Epub 2007 Jul 1. Nature. 2007. PMID: 17603471 Free PMC article.

2

Widespread transcription at neuronal activity-regulated enhancers.

Kim TK, Hemberg M, Gray JM, Costa AM, Bear DM, Wu J, Harmin DA, Laptewicz M, Barbara-Haley K, Kuersten S, Markenscoff-Papadimitriou E, Kuhl D, Bito H, Worley PF, Kreiman G, Greenberg ME. Kim TK, et al. Nature. 2010 May 13;465(7295):182-7. doi: 10.1038/nature09033. Epub 2010 Apr 14. Nature. 2010. PMID: 20393465 Free PMC article.

3

Activity-dependent regulation of inhibitory synapse development by Npas4.

Lin Y, Bloodgood BL, Hauser JL, Lapan AD, Koon AC, Kim TK, Hu LS, Malik AN, Greenberg ME. Lin Y, et al. Among authors: kim tk. Nature. 2008 Oct 30;455(7217):1198-204. doi: 10.1038/nature07319. Epub 2008 Sep 24. Nature. 2008. PMID: 18815592 Free PMC article.

4

START: an automated tool for serial analysis of chromatin occupancy data.

Marinescu VD, Kohane IS, Kim TK, Harmin DA, Greenberg ME, Riva A. Marinescu VD, et al. Among authors: kim tk. Bioinformatics. 2006 Apr 15;22(8):999-1001. doi: 10.1093/bioinformatics/btl062. Epub 2006 Feb 24. Bioinformatics. 2006. PMID: 16500934

5

Genomic Views of Transcriptional Enhancers: Essential Determinants of Cellular Identity and Activity-Dependent Responses in the CNS.

Gray JM, Kim TK, West AE, Nord AS, Markenscoff-Papadimitriou E, Lomvardas S. Gray JM, et al. Among authors: kim tk. J Neurosci. 2015 Oct 14;35(41):13819-26. doi: 10.1523/JNEUROSCI.2622-15.2015. J Neurosci. 2015. PMID: 26468181 Free PMC article. Review.

6

Enhancer RNAs stimulate Pol II pause release by harnessing multivalent interactions to NELF.

Gorbovytska V, Kim SK, Kuybu F, Götze M, Um D, Kang K, Pittroff A, Brennecke T, Schneider LM, Leitner A, Kim TK, Kuhn CD. Gorbovytska V, et al. Among authors: kim tk, kim sk. Nat Commun. 2022 May 4;13(1):2429. doi: 10.1038/s41467-022-29934-w. Nat Commun. 2022. PMID: 35508485 Free PMC article.

7

Stimulus-specific combinatorial functionality of neuronal c-fos enhancers.

Joo JY, Schaukowitch K, Farbiak L, Kilaru G, Kim TK. Joo JY, et al. Among authors: kim tk. Nat Neurosci. 2016 Jan;19(1):75-83. doi: 10.1038/nn.4170. Epub 2015 Nov 23. Nat Neurosci. 2016. PMID: 26595656 Free PMC article.

8

Enhancer RNAs: a class of long noncoding RNAs synthesized at enhancers.

Kim TK, Hemberg M, Gray JM. Kim TK, et al. Cold Spring Harb Perspect Biol. 2015 Jan 5;7(1):a018622. doi: 10.1101/cshperspect.a018622. Cold Spring Harb Perspect Biol. 2015. PMID: 25561718 Free PMC article. Review.

9

A retrograde neuronal survival response: target-derived neurotrophins regulate MEF2D and bcl-w.

Pazyra-Murphy MF, Hans A, Courchesne SL, Karch C, Cosker KE, Heerssen HM, Watson FL, Kim T, Greenberg ME, Segal RA. Pazyra-Murphy MF, et al. J Neurosci. 2009 May 20;29(20):6700-9. doi: 10.1523/JNEUROSCI.0233-09.2009. J Neurosci. 2009. PMID: 19458239 Free PMC article.

10

Genome-wide analysis of MEF2 transcriptional program reveals synaptic target genes and neuronal activity-dependent polyadenylation site selection.

Flavell SW, Kim TK, Gray JM, Harmin DA, Hemberg M, Hong EJ, Markenscoff-Papadimitriou E, Bear DM, Greenberg ME. Flavell SW, et al. Among authors: kim tk. Neuron. 2008 Dec 26;60(6):1022-38. doi: 10.1016/j.neuron.2008.11.029. Neuron. 2008. PMID: 19109909 Free PMC article.

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