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A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps.
Yim YS, Moak P, Sanchez-Villeda H, Musket TA, Close P, Klein PE, Mullet JE, McMullen MD, Fang Z, Schaeffer ML, Gardiner JM, Coe EH Jr, Davis GL. Yim YS, et al. Among authors: sanchez villeda h. BMC Genomics. 2007 Feb 9;8:47. doi: 10.1186/1471-2164-8-47. BMC Genomics. 2007. PMID: 17291341 Free PMC article.
Access to the maize genome: an integrated physical and genetic map.
Coe E, Cone K, McMullen M, Chen SS, Davis G, Gardiner J, Liscum E, Polacco M, Paterson A, Sanchez-Villeda H, Soderlund C, Wing R. Coe E, et al. Plant Physiol. 2002 Jan;128(1):9-12. doi: 10.1104/pp.128.1.9. Plant Physiol. 2002. PMID: 11788746 Free PMC article. No abstract available.
Development and mapping of SSR markers for maize.
Sharopova N, McMullen MD, Schultz L, Schroeder S, Sanchez-Villeda H, Gardiner J, Bergstrom D, Houchins K, Melia-Hancock S, Musket T, Duru N, Polacco M, Edwards K, Ruff T, Register JC, Brouwer C, Thompson R, Velasco R, Chin E, Lee M, Woodman-Clikeman W, Long MJ, Liscum E, Cone K, Davis G, Coe EH Jr. Sharopova N, et al. Plant Mol Biol. 2002 Mar-Apr;48(5-6):463-81. doi: 10.1023/a:1014868625533. Plant Mol Biol. 2002. PMID: 12004892
Genetic, physical, and informatics resources for maize. On the road to an integrated map.
Cone KC, McMullen MD, Bi IV, Davis GL, Yim YS, Gardiner JM, Polacco ML, Sanchez-Villeda H, Fang Z, Schroeder SG, Havermann SA, Bowers JE, Paterson AH, Soderlund CA, Engler FW, Wing RA, Coe EH Jr. Cone KC, et al. Among authors: sanchez villeda h. Plant Physiol. 2002 Dec;130(4):1598-605. doi: 10.1104/pp.012245. Plant Physiol. 2002. PMID: 12481043 Free PMC article. Review. No abstract available.
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr. Gardiner J, et al. Among authors: sanchez villeda h. Plant Physiol. 2004 Apr;134(4):1317-26. doi: 10.1104/pp.103.034538. Epub 2004 Mar 12. Plant Physiol. 2004. PMID: 15020742 Free PMC article.
Physical and genetic structure of the maize genome reflects its complex evolutionary history.
Wei F, Coe E, Nelson W, Bharti AK, Engler F, Butler E, Kim H, Goicoechea JL, Chen M, Lee S, Fuks G, Sanchez-Villeda H, Schroeder S, Fang Z, McMullen M, Davis G, Bowers JE, Paterson AH, Schaeffer M, Gardiner J, Cone K, Messing J, Soderlund C, Wing RA. Wei F, et al. Among authors: sanchez villeda h. PLoS Genet. 2007 Jul;3(7):e123. doi: 10.1371/journal.pgen.0030123. PLoS Genet. 2007. PMID: 17658954 Free PMC article.
DNAAlignEditor: DNA alignment editor tool.
Sanchez-Villeda H, Schroeder S, Flint-Garcia S, Guill KE, Yamasaki M, McMullen MD. Sanchez-Villeda H, et al. BMC Bioinformatics. 2008 Mar 19;9:154. doi: 10.1186/1471-2105-9-154. BMC Bioinformatics. 2008. PMID: 18366684 Free PMC article.
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