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Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer.
Whiteaker JR, Zhang H, Zhao L, Wang P, Kelly-Spratt KS, Ivey RG, Piening BD, Feng LC, Kasarda E, Gurley KE, Eng JK, Chodosh LA, Kemp CJ, McIntosh MW, Paulovich AG. Whiteaker JR, et al. Among authors: zhang h. J Proteome Res. 2007 Oct;6(10):3962-75. doi: 10.1021/pr070202v. Epub 2007 Aug 21. J Proteome Res. 2007. PMID: 17711321
Signal maps for mass spectrometry-based comparative proteomics.
Prakash A, Mallick P, Whiteaker J, Zhang H, Paulovich A, Flory M, Lee H, Aebersold R, Schwikowski B. Prakash A, et al. Among authors: zhang h. Mol Cell Proteomics. 2006 Mar;5(3):423-32. doi: 10.1074/mcp.M500133-MCP200. Epub 2005 Nov 3. Mol Cell Proteomics. 2006. PMID: 16269421 Free article.
Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments.
Rauch A, Bellew M, Eng J, Fitzgibbon M, Holzman T, Hussey P, Igra M, Maclean B, Lin CW, Detter A, Fang R, Faca V, Gafken P, Zhang H, Whiteaker J, States D, Hanash S, Paulovich A, McIntosh MW. Rauch A, et al. Among authors: zhang h. J Proteome Res. 2006 Jan;5(1):112-21. doi: 10.1021/pr0503533. J Proteome Res. 2006. PMID: 16396501
Head-to-head comparison of serum fractionation techniques.
Whiteaker JR, Zhang H, Eng JK, Fang R, Piening BD, Feng LC, Lorentzen TD, Schoenherr RM, Keane JF, Holzman T, Fitzgibbon M, Lin C, Zhang H, Cooke K, Liu T, Camp DG 2nd, Anderson L, Watts J, Smith RD, McIntosh MW, Paulovich AG. Whiteaker JR, et al. Among authors: zhang h. J Proteome Res. 2007 Feb;6(2):828-36. doi: 10.1021/pr0604920. J Proteome Res. 2007. PMID: 17269739
Assessing bias in experiment design for large scale mass spectrometry-based quantitative proteomics.
Prakash A, Piening B, Whiteaker J, Zhang H, Shaffer SA, Martin D, Hohmann L, Cooke K, Olson JM, Hansen S, Flory MR, Lee H, Watts J, Goodlett DR, Aebersold R, Paulovich A, Schwikowski B. Prakash A, et al. Among authors: zhang h. Mol Cell Proteomics. 2007 Oct;6(10):1741-8. doi: 10.1074/mcp.M600470-MCP200. Epub 2007 Jul 7. Mol Cell Proteomics. 2007. PMID: 17617667 Free article.
127,728 results
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