Arnaout RA - Search Results

1

Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements.

Dostie J, Richmond TA, Arnaout RA, Selzer RR, Lee WL, Honan TA, Rubio ED, Krumm A, Lamb J, Nusbaum C, Green RD, Dekker J. Dostie J, et al. Among authors: arnaout ra. Genome Res. 2006 Oct;16(10):1299-309. doi: 10.1101/gr.5571506. Epub 2006 Sep 5. Genome Res. 2006. PMID: 16954542 Free PMC article.

2

High-resolution description of antibody heavy-chain repertoires in humans.

Arnaout R, Lee W, Cahill P, Honan T, Sparrow T, Weiand M, Nusbaum C, Rajewsky K, Koralov SB. Arnaout R, et al. PLoS One. 2011;6(8):e22365. doi: 10.1371/journal.pone.0022365. Epub 2011 Aug 4. PLoS One. 2011. PMID: 21829618 Free PMC article.

3

Quantitative deep sequencing reveals dynamic HIV-1 escape and large population shifts during CCR5 antagonist therapy in vivo.

Tsibris AM, Korber B, Arnaout R, Russ C, Lo CC, Leitner T, Gaschen B, Theiler J, Paredes R, Su Z, Hughes MD, Gulick RM, Greaves W, Coakley E, Flexner C, Nusbaum C, Kuritzkes DR. Tsibris AM, et al. PLoS One. 2009 May 25;4(5):e5683. doi: 10.1371/journal.pone.0005683. PLoS One. 2009. PMID: 19479085 Free PMC article.

4

Protein evolutionary rates correlate with expression independently of synonymous substitutions in Helicobacter pylori.

Sällström B, Arnaout RA, Davids W, Bjelkmar P, Andersson SG. Sällström B, et al. Among authors: arnaout ra. J Mol Evol. 2006 May;62(5):600-14. doi: 10.1007/s00239-005-0104-5. Epub 2006 Apr 1. J Mol Evol. 2006. PMID: 16586017

5

Antibody repertoire deep sequencing reveals antigen-independent selection in maturing B cells.

Kaplinsky J, Li A, Sun A, Coffre M, Koralov SB, Arnaout R. Kaplinsky J, et al. Proc Natl Acad Sci U S A. 2014 Jun 24;111(25):E2622-9. doi: 10.1073/pnas.1403278111. Epub 2014 Jun 9. Proc Natl Acad Sci U S A. 2014. PMID: 24927543 Free PMC article.

6

The landscape of inappropriate laboratory testing: a 15-year meta-analysis.

Zhi M, Ding EL, Theisen-Toupal J, Whelan J, Arnaout R. Zhi M, et al. PLoS One. 2013 Nov 15;8(11):e78962. doi: 10.1371/journal.pone.0078962. eCollection 2013. PLoS One. 2013. PMID: 24260139 Free PMC article. Review.

7

Advantages and limitations of anticipating laboratory test results from regression- and tree-based rules derived from electronic health-record data.

Mohammad F, Theisen-Toupal JC, Arnaout R. Mohammad F, et al. PLoS One. 2014 Apr 14;9(4):e92199. doi: 10.1371/journal.pone.0092199. eCollection 2014. PLoS One. 2014. PMID: 24732572 Free PMC article.

8

Robust estimates of overall immune-repertoire diversity from high-throughput measurements on samples.

Kaplinsky J, Arnaout R. Kaplinsky J, et al. Nat Commun. 2016 Jun 15;7:11881. doi: 10.1038/ncomms11881. Nat Commun. 2016. PMID: 27302887 Free PMC article.

9

Visualizing omicron: COVID-19 deaths vs. cases over time.

Arnaout R, Arnaout R. Arnaout R, et al. PLoS One. 2022 Apr 19;17(4):e0265233. doi: 10.1371/journal.pone.0265233. eCollection 2022. PLoS One. 2022. PMID: 35439253 Free PMC article.

10

Repertoire-scale measures of antigen binding.

Arora R, Arnaout R. Arora R, et al. Proc Natl Acad Sci U S A. 2022 Aug 23;119(34):e2203505119. doi: 10.1073/pnas.2203505119. Epub 2022 Aug 15. Proc Natl Acad Sci U S A. 2022. PMID: 35969768 Free PMC article.

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