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A high-resolution map of transcription in the yeast genome.
David L, Huber W, Granovskaia M, Toedling J, Palm CJ, Bofkin L, Jones T, Davis RW, Steinmetz LM. David L, et al. Among authors: huber w. Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5320-5. doi: 10.1073/pnas.0601091103. Epub 2006 Mar 28. Proc Natl Acad Sci U S A. 2006. PMID: 16569694 Free PMC article.
Ringo--an R/Bioconductor package for analyzing ChIP-chip readouts.
Toedling J, Skylar O, Krueger T, Fischer JJ, Sperling S, Huber W. Toedling J, et al. Among authors: huber w. BMC Bioinformatics. 2007 Jun 26;8:221. doi: 10.1186/1471-2105-8-221. BMC Bioinformatics. 2007. PMID: 17594472 Free PMC article.
Analyzing ChIP-chip data using bioconductor.
Toedling J, Huber W. Toedling J, et al. Among authors: huber w. PLoS Comput Biol. 2008 Nov;4(11):e1000227. doi: 10.1371/journal.pcbi.1000227. Epub 2008 Nov 28. PLoS Comput Biol. 2008. PMID: 19043553 Free PMC article. No abstract available.
Bidirectional promoters generate pervasive transcription in yeast.
Xu Z, Wei W, Gagneur J, Perocchi F, Clauder-Münster S, Camblong J, Guffanti E, Stutz F, Huber W, Steinmetz LM. Xu Z, et al. Among authors: huber w. Nature. 2009 Feb 19;457(7232):1033-7. doi: 10.1038/nature07728. Epub 2009 Jan 25. Nature. 2009. PMID: 19169243 Free PMC article.
Genome-wide allele- and strand-specific expression profiling.
Gagneur J, Sinha H, Perocchi F, Bourgon R, Huber W, Steinmetz LM. Gagneur J, et al. Among authors: huber w. Mol Syst Biol. 2009;5:274. doi: 10.1038/msb.2009.31. Epub 2009 Jun 16. Mol Syst Biol. 2009. PMID: 19536197 Free PMC article.
985 results