Zhu X - Search Results

1

NPInter: the noncoding RNAs and protein related biomacromolecules interaction database.

Wu T, Wang J, Liu C, Zhang Y, Shi B, Zhu X, Zhang Z, Skogerbø G, Chen L, Lu H, Zhao Y, Chen R. Wu T, et al. Among authors: zhu x. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D150-2. doi: 10.1093/nar/gkj025. Nucleic Acids Res. 2006. PMID: 16381834 Free PMC article.

2

Topological structure analysis of the protein-protein interaction network in budding yeast.

Bu D, Zhao Y, Cai L, Xue H, Zhu X, Lu H, Zhang J, Sun S, Ling L, Zhang N, Li G, Chen R. Bu D, et al. Among authors: zhu x. Nucleic Acids Res. 2003 May 1;31(9):2443-50. doi: 10.1093/nar/gkg340. Nucleic Acids Res. 2003. PMID: 12711690 Free PMC article.

3

The interactome as a tree--an attempt to visualize the protein-protein interaction network in yeast.

Lu H, Zhu X, Liu H, Skogerbø G, Zhang J, Zhang Y, Cai L, Zhao Y, Sun S, Xu J, Bu D, Chen R. Lu H, et al. Among authors: zhu x. Nucleic Acids Res. 2004 Sep 8;32(16):4804-11. doi: 10.1093/nar/gkh814. Print 2004. Nucleic Acids Res. 2004. PMID: 15356297 Free PMC article.

4

Profiling Caenorhabditis elegans non-coding RNA expression with a combined microarray.

He H, Cai L, Skogerbø G, Deng W, Liu T, Zhu X, Wang Y, Jia D, Zhang Z, Tao Y, Zeng H, Aftab MN, Cui Y, Liu G, Chen R. He H, et al. Among authors: zhu x. Nucleic Acids Res. 2006 May 31;34(10):2976-83. doi: 10.1093/nar/gkl371. Print 2006. Nucleic Acids Res. 2006. PMID: 16738136 Free PMC article.

5

Systematic identification and characterization of chicken (Gallus gallus) ncRNAs.

Zhang Y, Wang J, Huang S, Zhu X, Liu J, Yang N, Song D, Wu R, Deng W, Skogerbø G, Wang XJ, Chen R, Zhu D. Zhang Y, et al. Among authors: zhu d, zhu x. Nucleic Acids Res. 2009 Oct;37(19):6562-74. doi: 10.1093/nar/gkp704. Epub 2009 Aug 31. Nucleic Acids Res. 2009. PMID: 19720738 Free PMC article.

6

Organization of the Caenorhabditis elegans small non-coding transcriptome: genomic features, biogenesis, and expression.

Deng W, Zhu X, Skogerbø G, Zhao Y, Fu Z, Wang Y, He H, Cai L, Sun H, Liu C, Li B, Bai B, Wang J, Jia D, Sun S, He H, Cui Y, Wang Y, Bu D, Chen R. Deng W, et al. Among authors: zhu x. Genome Res. 2006 Jan;16(1):20-9. doi: 10.1101/gr.4139206. Epub 2005 Dec 12. Genome Res. 2006. PMID: 16344563 Free PMC article.

7

Identifying Hfq-binding small RNA targets in Escherichia coli.

Zhang Y, Sun S, Wu T, Wang J, Liu C, Chen L, Zhu X, Zhao Y, Zhang Z, Shi B, Lu H, Chen R. Zhang Y, et al. Among authors: zhu x. Biochem Biophys Res Commun. 2006 May 12;343(3):950-5. doi: 10.1016/j.bbrc.2006.02.196. Epub 2006 Mar 20. Biochem Biophys Res Commun. 2006. PMID: 16574072

8

Phylophenetic properties of metabolic pathway topologies as revealed by global analysis.

Zhang Y, Li S, Skogerbø G, Zhang Z, Zhu X, Zhang Z, Sun S, Lu H, Shi B, Chen R. Zhang Y, et al. Among authors: zhu x. BMC Bioinformatics. 2006 May 9;7:252. doi: 10.1186/1471-2105-7-252. BMC Bioinformatics. 2006. PMID: 16684350 Free PMC article.

9

Integrated analysis of multiple data sources reveals modular structure of biological networks.

Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R. Lu H, et al. Among authors: zhu x. Biochem Biophys Res Commun. 2006 Jun 23;345(1):302-9. doi: 10.1016/j.bbrc.2006.04.088. Epub 2006 Apr 27. Biochem Biophys Res Commun. 2006. PMID: 16690033

10

Dynamic changes in subgraph preference profiles of crucial transcription factors.

Zhang Z, Liu C, Skogerbø G, Zhu X, Lu H, Chen L, Shi B, Zhang Y, Wang J, Wu T, Chen R. Zhang Z, et al. Among authors: zhu x. PLoS Comput Biol. 2006 May;2(5):e47. doi: 10.1371/journal.pcbi.0020047. Epub 2006 May 12. PLoS Comput Biol. 2006. PMID: 16699597 Free PMC article.

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