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Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution.
Ghedin E, Sengamalay NA, Shumway M, Zaborsky J, Feldblyum T, Subbu V, Spiro DJ, Sitz J, Koo H, Bolotov P, Dernovoy D, Tatusova T, Bao Y, St George K, Taylor J, Lipman DJ, Fraser CM, Taubenberger JK, Salzberg SL. Ghedin E, et al. Among authors: dernovoy d. Nature. 2005 Oct 20;437(7062):1162-6. doi: 10.1038/nature04239. Epub 2005 Oct 5. Nature. 2005. PMID: 16208317
FLAN: a web server for influenza virus genome annotation.
Bao Y, Bolotov P, Dernovoy D, Kiryutin B, Tatusova T. Bao Y, et al. Among authors: dernovoy d. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W280-4. doi: 10.1093/nar/gkm354. Epub 2007 Jun 1. Nucleic Acids Res. 2007. PMID: 17545199 Free PMC article.
Reannotation of Shewanella oneidensis genome.
Daraselia N, Dernovoy D, Tian Y, Borodovsky M, Tatusov R, Tatusova T. Daraselia N, et al. Among authors: dernovoy d. OMICS. 2003 Summer;7(2):171-5. doi: 10.1089/153623103322246566. OMICS. 2003. PMID: 14506846
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.
Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, Powell E, Keefe R, Ehrlich NE, Shen K, Hayes J, Barbadora K, Klimke W, Dernovoy D, Tatusova T, Parkhill J, Bentley SD, Post JC, Ehrlich GD, Hu FZ. Hiller NL, et al. Among authors: dernovoy d. J Bacteriol. 2007 Nov;189(22):8186-95. doi: 10.1128/JB.00690-07. Epub 2007 Aug 3. J Bacteriol. 2007. PMID: 17675389 Free PMC article.