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Page 1
Complete genome sequence of the Q-fever pathogen Coxiella burnetii.
Seshadri R, Paulsen IT, Eisen JA, Read TD, Nelson KE, Nelson WC, Ward NL, Tettelin H, Davidsen TM, Beanan MJ, Deboy RT, Daugherty SC, Brinkac LM, Madupu R, Dodson RJ, Khouri HM, Lee KH, Carty HA, Scanlan D, Heinzen RA, Thompson HA, Samuel JE, Fraser CM, Heidelberg JF. Seshadri R, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2003 Apr 29;100(9):5455-60. doi: 10.1073/pnas.0931379100. Epub 2003 Apr 18. Proc Natl Acad Sci U S A. 2003. PMID: 12704232 Free PMC article.
The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium.
Eisen JA, Nelson KE, Paulsen IT, Heidelberg JF, Wu M, Dodson RJ, Deboy R, Gwinn ML, Nelson WC, Haft DH, Hickey EK, Peterson JD, Durkin AS, Kolonay JL, Yang F, Holt I, Umayam LA, Mason T, Brenner M, Shea TP, Parksey D, Nierman WC, Feldblyum TV, Hansen CL, Craven MB, Radune D, Vamathevan J, Khouri H, White O, Gruber TM, Ketchum KA, Venter JC, Tettelin H, Bryant DA, Fraser CM. Eisen JA, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2002 Jul 9;99(14):9509-14. doi: 10.1073/pnas.132181499. Epub 2002 Jul 1. Proc Natl Acad Sci U S A. 2002. PMID: 12093901 Free PMC article.
The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts.
Paulsen IT, Seshadri R, Nelson KE, Eisen JA, Heidelberg JF, Read TD, Dodson RJ, Umayam L, Brinkac LM, Beanan MJ, Daugherty SC, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Nelson WC, Ayodeji B, Kraul M, Shetty J, Malek J, Van Aken SE, Riedmuller S, Tettelin H, Gill SR, White O, Salzberg SL, Hoover DL, Lindler LE, Halling SM, Boyle SM, Fraser CM. Paulsen IT, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):13148-53. doi: 10.1073/pnas.192319099. Epub 2002 Sep 23. Proc Natl Acad Sci U S A. 2002. PMID: 12271122 Free PMC article.
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.
Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Daugherty S, Brinkac L, Beanan MJ, Haft DH, Nelson WC, Davidsen T, Zafar N, Zhou L, Liu J, Yuan Q, Khouri H, Fedorova N, Tran B, Russell D, Berry K, Utterback T, Van Aken SE, Feldblyum TV, D'Ascenzo M, Deng WL, Ramos AR, Alfano JR, Cartinhour S, Chatterjee AK, Delaney TP, Lazarowitz SG, Martin GB, Schneider DJ, Tang X, Bender CL, White O, Fraser CM, Collmer A. Buell CR, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2003 Sep 2;100(18):10181-6. doi: 10.1073/pnas.1731982100. Epub 2003 Aug 19. Proc Natl Acad Sci U S A. 2003. PMID: 12928499 Free PMC article.
Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83.
Nelson KE, Fleischmann RD, DeBoy RT, Paulsen IT, Fouts DE, Eisen JA, Daugherty SC, Dodson RJ, Durkin AS, Gwinn M, Haft DH, Kolonay JF, Nelson WC, Mason T, Tallon L, Gray J, Granger D, Tettelin H, Dong H, Galvin JL, Duncan MJ, Dewhirst FE, Fraser CM. Nelson KE, et al. Among authors: dodson rj. J Bacteriol. 2003 Sep;185(18):5591-601. doi: 10.1128/JB.185.18.5591-5601.2003. J Bacteriol. 2003. PMID: 12949112 Free PMC article.
Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes.
Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH, Selengut J, Ren Q, Brinkac LM, Madupu R, Kolonay J, Durkin SA, Daugherty SC, Shetty J, Shvartsbeyn A, Gebregeorgis E, Geer K, Tsegaye G, Malek J, Ayodeji B, Shatsman S, McLeod MP, Smajs D, Howell JK, Pal S, Amin A, Vashisth P, McNeill TZ, Xiang Q, Sodergren E, Baca E, Weinstock GM, Norris SJ, Fraser CM, Paulsen IT. Seshadri R, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2004 Apr 13;101(15):5646-51. doi: 10.1073/pnas.0307639101. Epub 2004 Apr 2. Proc Natl Acad Sci U S A. 2004. PMID: 15064399 Free PMC article.
The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.
Heidelberg JF, Seshadri R, Haveman SA, Hemme CL, Paulsen IT, Kolonay JF, Eisen JA, Ward N, Methe B, Brinkac LM, Daugherty SC, Deboy RT, Dodson RJ, Durkin AS, Madupu R, Nelson WC, Sullivan SA, Fouts D, Haft DH, Selengut J, Peterson JD, Davidsen TM, Zafar N, Zhou L, Radune D, Dimitrov G, Hance M, Tran K, Khouri H, Gill J, Utterback TR, Feldblyum TV, Wall JD, Voordouw G, Fraser CM. Heidelberg JF, et al. Among authors: dodson rj. Nat Biotechnol. 2004 May;22(5):554-9. doi: 10.1038/nbt959. Epub 2004 Apr 11. Nat Biotechnol. 2004. PMID: 15077118
Structural flexibility in the Burkholderia mallei genome.
Nierman WC, DeShazer D, Kim HS, Tettelin H, Nelson KE, Feldblyum T, Ulrich RL, Ronning CM, Brinkac LM, Daugherty SC, Davidsen TD, Deboy RT, Dimitrov G, Dodson RJ, Durkin AS, Gwinn ML, Haft DH, Khouri H, Kolonay JF, Madupu R, Mohammoud Y, Nelson WC, Radune D, Romero CM, Sarria S, Selengut J, Shamblin C, Sullivan SA, White O, Yu Y, Zafar N, Zhou L, Fraser CM. Nierman WC, et al. Among authors: dodson rj. Proc Natl Acad Sci U S A. 2004 Sep 28;101(39):14246-51. doi: 10.1073/pnas.0403306101. Epub 2004 Sep 17. Proc Natl Acad Sci U S A. 2004. PMID: 15377793 Free PMC article.
Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath).
Ward N, Larsen Ø, Sakwa J, Bruseth L, Khouri H, Durkin AS, Dimitrov G, Jiang L, Scanlan D, Kang KH, Lewis M, Nelson KE, Methé B, Wu M, Heidelberg JF, Paulsen IT, Fouts D, Ravel J, Tettelin H, Ren Q, Read T, DeBoy RT, Seshadri R, Salzberg SL, Jensen HB, Birkeland NK, Nelson WC, Dodson RJ, Grindhaug SH, Holt I, Eidhammer I, Jonasen I, Vanaken S, Utterback T, Feldblyum TV, Fraser CM, Lillehaug JR, Eisen JA. Ward N, et al. Among authors: dodson rj. PLoS Biol. 2004 Oct;2(10):e303. doi: 10.1371/journal.pbio.0020303. Epub 2004 Sep 21. PLoS Biol. 2004. PMID: 15383840 Free PMC article.
Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5.
Paulsen IT, Press CM, Ravel J, Kobayashi DY, Myers GS, Mavrodi DV, DeBoy RT, Seshadri R, Ren Q, Madupu R, Dodson RJ, Durkin AS, Brinkac LM, Daugherty SC, Sullivan SA, Rosovitz MJ, Gwinn ML, Zhou L, Schneider DJ, Cartinhour SW, Nelson WC, Weidman J, Watkins K, Tran K, Khouri H, Pierson EA, Pierson LS 3rd, Thomashow LS, Loper JE. Paulsen IT, et al. Among authors: dodson rj. Nat Biotechnol. 2005 Jul;23(7):873-8. doi: 10.1038/nbt1110. Epub 2005 Jun 26. Nat Biotechnol. 2005. PMID: 15980861 Free PMC article.
57 results