Bray JE - Search Results

1

The CATH database: an extended protein family resource for structural and functional genomics.

Pearl FM, Bennett CF, Bray JE, Harrison AP, Martin N, Shepherd A, Sillitoe I, Thornton J, Orengo CA. Pearl FM, et al. Among authors: bray je. Nucleic Acids Res. 2003 Jan 1;31(1):452-5. doi: 10.1093/nar/gkg062. Nucleic Acids Res. 2003. PMID: 12520050 Free PMC article.

2

The CATH protein family database: a resource for structural and functional annotation of genomes.

Orengo CA, Bray JE, Buchan DW, Harrison A, Lee D, Pearl FM, Sillitoe I, Todd AE, Thornton JM. Orengo CA, et al. Among authors: bray je. Proteomics. 2002 Jan;2(1):11-21. Proteomics. 2002. PMID: 11788987 Review.

3

The CATH extended protein-family database: providing structural annotations for genome sequences.

Pearl FM, Lee D, Bray JE, Buchan DW, Shepherd AJ, Orengo CA. Pearl FM, et al. Among authors: bray je. Protein Sci. 2002 Feb;11(2):233-44. doi: 10.1110/ps.16802. Protein Sci. 2002. PMID: 11790833 Free PMC article.

4

Gene3D: structural assignments for the biologist and bioinformaticist alike.

Buchan DW, Rison SC, Bray JE, Lee D, Pearl F, Thornton JM, Orengo CA. Buchan DW, et al. Among authors: bray je. Nucleic Acids Res. 2003 Jan 1;31(1):469-73. doi: 10.1093/nar/gkg051. Nucleic Acids Res. 2003. PMID: 12520054 Free PMC article.

5

A practical and robust sequence search strategy for structural genomics target selection.

Bray JE, Marsden RL, Rison SC, Savchenko A, Edwards AM, Thornton JM, Orengo CA. Bray JE, et al. Bioinformatics. 2004 Sep 22;20(14):2288-95. doi: 10.1093/bioinformatics/bth240. Epub 2004 Jun 16. Bioinformatics. 2004. PMID: 15201178

6

The CATH Database provides insights into protein structure/function relationships.

Orengo CA, Pearl FM, Bray JE, Todd AE, Martin AC, Lo Conte L, Thornton JM. Orengo CA, et al. Among authors: bray je. Nucleic Acids Res. 1999 Jan 1;27(1):275-9. doi: 10.1093/nar/27.1.275. Nucleic Acids Res. 1999. PMID: 9847200 Free PMC article.

7

Assigning genomic sequences to CATH.

Pearl FM, Lee D, Bray JE, Sillitoe I, Todd AE, Harrison AP, Thornton JM, Orengo CA. Pearl FM, et al. Among authors: bray je. Nucleic Acids Res. 2000 Jan 1;28(1):277-82. doi: 10.1093/nar/28.1.277. Nucleic Acids Res. 2000. PMID: 10592246 Free PMC article.

8

The CATH Dictionary of Homologous Superfamilies (DHS): a consensus approach for identifying distant structural homologues.

Bray JE, Todd AE, Pearl FM, Thornton JM, Orengo CA. Bray JE, et al. Protein Eng. 2000 Mar;13(3):153-65. doi: 10.1093/protein/13.3.153. Protein Eng. 2000. PMID: 10775657

9

Using the CATH domain database to assign structures and functions to the genome sequences.

Pearl F, Todd AE, Bray JE, Martin AC, Salamov AA, Suwa M, Swindells MB, Thornton JM, Orengo CA. Pearl F, et al. Among authors: bray je. Biochem Soc Trans. 2000 Feb;28(2):269-75. doi: 10.1042/bst0280269. Biochem Soc Trans. 2000. PMID: 10816141

10

A rapid classification protocol for the CATH Domain Database to support structural genomics.

Pearl FM, Martin N, Bray JE, Buchan DW, Harrison AP, Lee D, Reeves GA, Shepherd AJ, Sillitoe I, Todd AE, Thornton JM, Orengo CA. Pearl FM, et al. Among authors: bray je. Nucleic Acids Res. 2001 Jan 1;29(1):223-7. doi: 10.1093/nar/29.1.223. Nucleic Acids Res. 2001. PMID: 11125098 Free PMC article.

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