A prescription for engineering PFAS biodegradation

Biochem J. 2024 Dec 4;481(23):1757-1770. doi: 10.1042/BCJ20240283.

Abstract

Per- and polyfluorinated chemicals (PFAS) are of rising concern due to environmental persistence and emerging evidence of health risks to humans. Environmental persistence is largely attributed to a failure of microbes to degrade PFAS. PFAS recalcitrance has been proposed to result from chemistry, specifically C-F bond strength, or biology, largely negative selection from fluoride toxicity. Given natural evolution has many hurdles, this review advocates for a strategy of laboratory engineering and evolution. Enzymes identified to participate in defluorination reactions have been discovered in all Enzyme Commission classes, providing a palette for metabolic engineering. In vivo PFAS biodegradation will require multiple types of reactions and powerful fluoride mitigation mechanisms to act in concert. The necessary steps are to: (1) engineer bacteria that survive very high, unnatural levels of fluoride, (2) design, evolve, and screen for enzymes that cleave C-F bonds in a broader array of substrates, and (3) create overall physiological conditions that make for positive selective pressure with PFAS substrates.

Keywords: PFAS; biodegradation; bioengineering; enzymes; evolution; fluoride.

Publication types

  • Review

MeSH terms

  • Bacteria / enzymology
  • Bacteria / genetics
  • Bacteria / metabolism
  • Biodegradation, Environmental*
  • Environmental Pollutants / metabolism
  • Fluorides / metabolism
  • Fluorocarbons / chemistry
  • Fluorocarbons / metabolism
  • Humans
  • Metabolic Engineering / methods

Substances

  • Fluorocarbons
  • Environmental Pollutants
  • Fluorides