PPP3CA gene-related developmental and epileptic encephalopathy: Expanding the electro-clinical phenotype

Jacopo Favaro; Alessandro Iodice; Margherita Nosadini; Francesca Asta; Irene Toldo; Claudio Ancona; Elena Cavaliere; Maria Federica Pelizza; Gianluca Casara; Lucio Parmeggiani; Stefano Sartori

doi:10.1016/j.seizure.2024.08.017

PPP3CA gene-related developmental and epileptic encephalopathy: Expanding the electro-clinical phenotype

Seizure. 2024 Aug 24:121:253-261. doi: 10.1016/j.seizure.2024.08.017. Online ahead of print.

Affiliations

¹ Department of Women's and Child's Health, University of Padua, Padua, Italy; Paediatric Neurology and Neurophysiology Unit - University Hospital of Padua, Padova, Italy. Electronic address: jacopo.favaro@studenti.unipd.it.
² Child Neuropsychiatry Unit, S. Chiara Hospital, APSS, Trento, Italy.
³ Department of Women's and Child's Health, University of Padua, Padua, Italy; Paediatric Neurology and Neurophysiology Unit - University Hospital of Padua, Padova, Italy.
⁴ Paediatric Neurology and Neurophysiology Unit - University Hospital of Padua, Padova, Italy.
⁵ Department of Pediatric Neurology, Bolzano Hospital, Bolzano, Italy.

PMID: 39305655
DOI: 10.1016/j.seizure.2024.08.017

Abstract

Purpose: The objective of this study is to characterize the electro-clinical phenotype of individuals affected by the rare PPP3CA gene-related developmental and epileptic encephalopathy (DEE).

Methods: We provide a detailed electro-clinical description of four previously unreported subjects, with unremarkable structural brain MRI and a normal screening for inborn errors of metabolism, who carry pathogenic variants within the regulatory domain of the PPP3CA gene, which encodes for calcineurin. We also conducted a literature review via PubMed and SCOPUS (up to December 2023) to collect all the studies reporting clinical details of subjects with PPP3CA pathogenic variants within the regulatory domain.

Results: Our in-depth investigation reveals two distinct electro-clinical phenotypes with unique interictal and ictal patterns. Pathogenic variants within the calmodulin-binding domain result in childhood-onset epilepsy with focal and generalized seizures, developmental and intellectual impairments. Pathogenic variants within the regulatory domain lead to early onset drug-resistant severe epilepsy and potentially fatal outcomes. Comparative analysis with existing literature corroborates the notion that truncating mutations, prevalent in the regulatory domain but also possible in the calmodulin-binding domain, consistently associate with more profound disabilities and drug-resistant epilepsy.

Conclusion: Our study emphasizes the critical role of pathogenic variants' type and location on the severity of PPP3CA-related DEE. We also speculate, based on peculiar EEG patterns, on potential pathophysiological mechanisms involving calcineurin dysfunction and calcium homeostasis. In order to improve our understanding of this rare DEE, we need both collaborative efforts to gather larger cohorts and further experimental studies.

Keywords: Calcineurin; Calcium-related epileptogenesis; Developmental and epileptic encephalopathy; Drug-resistant epilepsy; Genotype-phenotype correlation.