Genomic characterization of an emerging Rickettsia barbariae isolated from tick eggs in northwestern China

Emerg Microbes Infect. 2024 Dec;13(1):2396870. doi: 10.1080/22221751.2024.2396870. Epub 2024 Sep 5.

Abstract

The continual emergence of tick-borne rickettsioses has garnered widespread global attention. Candidatus Rickettsia barbariae (Candidatus R. barbariae), which emerged in Italy in 2008, has been detected in humans from northwestern China. However, the lack of Candidatus R. barbariae genome and isolated strains limits the understanding of its biological characteristics and genomic features. Here, we isolated the Rickettsia for the first time from eggs of Rhipicephalus turanicus in northwestern China, and assembled its whole genome after next-generation sequencing, so we modified the proposed name to Rickettsia barbariae (R. barbariae) to conform to the International Code of Nomenclature of Prokaryotes. Phylogenetic analysis based on the whole genome revealed that it was most closely related to the pathogenic Rickettsia parkeri and Rickettsia africae. All virulence factors, present in the pathogenic spotted fever group rickettsiae, were identified in the R. barbariae isolate. These findings highlight the pathogenic potential of R. barbariae and the necessity for enhanced surveillance of the emerging Rickettsia in the human population.

Keywords: China; Rhipicephalus turanicus; Rickettsia barbariae; phylogenetic analysis; virulence factors; whole-genome sequencing.

MeSH terms

  • Animals
  • China
  • Genome, Bacterial*
  • Genomics
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Ovum / microbiology
  • Phylogeny*
  • Rhipicephalus / microbiology
  • Rickettsia Infections / microbiology
  • Rickettsia* / classification
  • Rickettsia* / genetics
  • Rickettsia* / isolation & purification
  • Virulence Factors / genetics
  • Whole Genome Sequencing

Substances

  • Virulence Factors

Supplementary concepts

  • Rickettsia parkeri
  • Rickettsia africae

Grants and funding

This work was supported by National Key Research and Development Program of China: [Grant Number 2023YFC2305901]; Natural Science Foundation of China: [Grant Number 81621005]; Postdoctoral Fellowship Program of CPSF: [Grant Number BX20240215].