Structural insights into the Caprin-2 HR1 domain in canonical Wnt signaling

J Biol Chem. 2024 Oct;300(10):107694. doi: 10.1016/j.jbc.2024.107694. Epub 2024 Aug 17.

Abstract

The canonical Wnt signaling pathway plays crucial roles in cell fate decisions as well as in pathogenesis of various diseases. Previously, we reported Caprin-2 as a new regulator of canonical Wnt signaling through a mechanism of facilitating LRP5/6 phosphorylation. Here, we resolved the crystal structure of the N-terminal homologous region 1 (HR1) domain of human Caprin-2. HR1 domain is so far only observed in Caprin-2 and its homologous protein Caprin-1, and the function of this domain remains largely mysterious. Here, the structure showed that HR1 domain of human Caprin-2 forms a homo-dimer and exhibits an overall structure roughly resembling the appearance of a pair of scissors. Moreover, we found that residues R200 and R201, which located at a basic cluster within the N-terminal "blades" region, are critical for Caprin-2's localization to the plasma membrane. In line with this, mutations targeting these two residues decrease Caprin-2's activity in the canonical Wnt signaling. Overall, we characterized a previously unknown "scissors"-like structure of the full-length HR1 domain and revealed its function in mediating Caprin-2's localization to the plasma membrane.

Keywords: Caprin-2; HR1 domain; canonical Wnt signaling; crystal structure; dimerization.

MeSH terms

  • Cell Membrane / metabolism
  • Crystallography, X-Ray
  • Cytoskeletal Proteins / chemistry
  • Cytoskeletal Proteins / genetics
  • Cytoskeletal Proteins / metabolism
  • HEK293 Cells
  • Humans
  • Low Density Lipoprotein Receptor-Related Protein-5 / chemistry
  • Low Density Lipoprotein Receptor-Related Protein-5 / genetics
  • Low Density Lipoprotein Receptor-Related Protein-5 / metabolism
  • Low Density Lipoprotein Receptor-Related Protein-6 / chemistry
  • Low Density Lipoprotein Receptor-Related Protein-6 / genetics
  • Low Density Lipoprotein Receptor-Related Protein-6 / metabolism
  • Phosphorylation
  • Protein Domains*
  • Protein Multimerization
  • RNA-Binding Proteins
  • Wnt Signaling Pathway*

Substances

  • CAPRIN2 protein, human
  • Low Density Lipoprotein Receptor-Related Protein-6
  • LRP6 protein, human
  • Low Density Lipoprotein Receptor-Related Protein-5
  • Cytoskeletal Proteins
  • LRP5 protein, human
  • RNA-Binding Proteins