Rapid, sensitive, and visual detection of pseudorabies virus with an RPA-CRISPR/EsCas13d-based dual-readout portable platform

Anal Chim Acta. 2024 Aug 22:1318:342918. doi: 10.1016/j.aca.2024.342918. Epub 2024 Jun 30.

Abstract

Pseudorabies viruses (PRV) pose a major threat to the global pig industry and public health. Rapid, intuitive, affordable, and accurate diagnostic testing is critical for controlling and eradicating infectious diseases. In this study, a portable detection platform based on RPA-CRISPR/EsCas13d was developed. The platform exhibits high sensitivity (1 copy/μL), good specificity, and no cross-reactivity with common pathogens. The platform uses rapid preamplification technology to provide visualization results (lateral flow assays or visual fluorescence) within 1 h. Fifty pig samples (including tissues, oral fluids, and serum) were tested using this platform and real-time quantitative polymerase chain reaction (qPCR), showing 34.0 % (17 of 50) PRV positivity with the portable CRISPR/EsCas13d dual-readout platform, consistent with the qPCR results. These results highlight the stability, sensitivity, efficiency, and low equipment requirements of the portable platform. Additionally, a novel point-of-care test is being developed for clinical use in remote rural and resource-limited areas, which could be a prospective measure for monitoring the progression of pseudorabies and other infectious diseases worldwide.

Keywords: CRISPR diagnostics; Infectious disease; Pig; Pseudorabies; Quantitative polymerase chain reaction.

MeSH terms

  • Animals
  • CRISPR-Cas Systems* / genetics
  • Herpesvirus 1, Suid* / genetics
  • Herpesvirus 1, Suid* / isolation & purification
  • Pseudorabies / diagnosis
  • Pseudorabies / virology
  • Swine
  • Swine Diseases / diagnosis
  • Swine Diseases / virology