lncRNA Profiling of Exosomes and Its Communication Role in Regulating Silica-Stimulated Macrophage Apoptosis and Fibroblast Activation

Biomolecules. 2024 Jan 24;14(2):146. doi: 10.3390/biom14020146.

Abstract

Long-term silica particle exposure leads to interstitial pulmonary inflammation and fibrosis, called silicosis. Silica-activated macrophages secrete a wide range of cytokines resulting in persistent inflammation. In addition, silica-stimulated activation of fibroblast is another checkpoint in the progression of silicosis. The pathogenesis after silica exposure is complex, involving intercellular communication and intracellular signaling pathway transduction, which was ignored previously. Exosomes are noteworthy because of their crucial role in intercellular communication by delivering bioactive substances, such as lncRNA. However, the expression profile of exosomal lncRNA in silicosis has not been reported yet. In this study, exosomes were isolated from the peripheral serum of silicosis patients or healthy donors. The exosomal lncRNAs were profiled using high-throughput sequencing technology. Target genes were predicted, and functional annotation was performed using differentially expressed lncRNAs. Eight aberrant expressed exosomal lncRNAs were considered to play a key role in the process of silicosis according to the OPLS-DA. Furthermore, the increased expression of lncRNA MSTRG.43085.16 was testified in vitro. Its target gene PARP1 was critical in regulating apoptosis based on bioinformatics analysis. In addition, the effects of exosomes on macrophage apoptosis and fibroblast activation were checked based on a co-cultured system. Our findings suggested that upregulation of lncRNA MSTRG.43085.16 could regulate silica-induced macrophage apoptosis through elevating PARP1 expression, and promote fibroblast activation, implying that the exosomal lncRNA MSTRG.43085.16 might have potential as a biomarker for the early diagnosis of silicosis.

Keywords: cell communication; exosomes; fibroblasts; long non-coding RNA; macrophages; silicosis.

MeSH terms

  • Apoptosis / genetics
  • Exosomes* / genetics
  • Exosomes* / metabolism
  • Fibroblasts / metabolism
  • Humans
  • Macrophages / metabolism
  • RNA, Long Noncoding* / genetics
  • RNA, Long Noncoding* / metabolism
  • Silicon Dioxide
  • Silicosis* / genetics
  • Silicosis* / metabolism
  • Silicosis* / pathology

Substances

  • Silicon Dioxide
  • RNA, Long Noncoding

Grants and funding

This study was supported by the Natural Science Foundation of Liaoning Province [grant number 2022-MS-201], the Natural Science Foundation of Tianjin [grant number 20JCYBJC00270], and the Key Discipline Program of the Tianjin Health Commission Science and Technology Program [grant number TJWJ2023XK029].