Paper-based detection of Epstein-Barr virus using asymmetric polymerase chain reaction and gold silicon particles

Anal Chim Acta. 2022 Mar 8:1197:339514. doi: 10.1016/j.aca.2022.339514. Epub 2022 Jan 22.

Abstract

A new paper-based lateral flow nucleic acid (LFNA) test platform was established in this study using asymmetric polymerase chain ceaction (A-PCR) for signal amplification. This new method allowed a visual detection of Epstein-Barr virus (EBV) nucleic acids with high specificity and low cost. In addition, as part of our strategy we employed a sandwich system of capture probe (CP)/gold nanoparticles (AuNPS) and silicon dioxide (SiO2) (AuNPS@SiO2) nanospheres/target DNA/avidin complexes as the sensing platform. Biotin-labeled target DNA was obtained by A-PCR and later introduced in the LF device. The CP/target DNA/AuNPS@SiO2 complexes were captured on the test zone by the specific reaction between biotin and avidin, and the remaining CP/AuNPS@SiO2 particles were captured on the quality control zone by the hybridization between CP and a quality control probe. Au@SiO2 accumulation in the test and quality control zones of the device enabled a visual detection of the specific target sequences. The method detection limit was 50 nM of the target DNA, which was lower than that of the LFNA biosensor (LFNAB) without PCR amplification and Au@SiO2 particles. In conclusion, the novel paper-based platform described here is a low cost, efficient and fast visual detection method that offers high sensitivity and other benefits compared to alternative methods in use.

Keywords: A paper based platform; A-PCR; Asymmetric polymerase chain reaction; AuNPS@SiO2 nanospheres; Fast diagnostics; Nucleic acid sensing.

MeSH terms

  • Biosensing Techniques*
  • Epstein-Barr Virus Infections*
  • Gold
  • Herpesvirus 4, Human / genetics
  • Humans
  • Limit of Detection
  • Metal Nanoparticles*
  • Polymerase Chain Reaction
  • Silicon Dioxide

Substances

  • Gold
  • Silicon Dioxide