Abstract
Frameshifting of mRNA during translation provides a strategy to expand the coding repertoire of cells and viruses. How and where in the elongation cycle +1-frameshifting occurs remains poorly understood. We describe seven ~3.5-Å-resolution cryo-EM structures of 70S ribosome complexes, allowing visualization of elongation and translocation by the GTPase elongation factor G (EF-G). Four structures with a + 1-frameshifting-prone mRNA reveal that frameshifting takes place during translocation of tRNA and mRNA. Prior to EF-G binding, the pre-translocation complex features an in-frame tRNA-mRNA pairing in the A site. In the partially translocated structure with EF-G•GDPCP, the tRNA shifts to the +1-frame near the P site, rendering the freed mRNA base to bulge between the P and E sites and to stack on the 16S rRNA nucleotide G926. The ribosome remains frameshifted in the nearly post-translocation state. Our findings demonstrate that the ribosome and EF-G cooperate to induce +1 frameshifting during tRNA-mRNA translocation.
© 2021. The Author(s).
Publication types
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Research Support, N.I.H., Extramural
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Research Support, Non-U.S. Gov't
MeSH terms
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Biocatalysis
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Cryoelectron Microscopy
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Escherichia coli / genetics
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Escherichia coli / metabolism
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Escherichia coli Proteins / chemistry
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Escherichia coli Proteins / genetics
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Escherichia coli Proteins / metabolism
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Frameshifting, Ribosomal / genetics*
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Models, Molecular
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Nucleic Acid Conformation
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Peptide Chain Elongation, Translational / genetics*
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Peptide Elongation Factor G / chemistry
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Peptide Elongation Factor G / genetics*
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Peptide Elongation Factor G / metabolism
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Protein Conformation
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RNA, Messenger / chemistry
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RNA, Messenger / genetics*
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RNA, Messenger / metabolism
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RNA, Ribosomal, 16S / chemistry
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RNA, Ribosomal, 16S / genetics
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RNA, Ribosomal, 16S / metabolism
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RNA, Transfer / chemistry
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RNA, Transfer / genetics*
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RNA, Transfer / metabolism
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Ribosomes / genetics*
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Ribosomes / metabolism
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Ribosomes / ultrastructure
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tRNA Methyltransferases / genetics
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tRNA Methyltransferases / metabolism
Substances
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Escherichia coli Proteins
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Peptide Elongation Factor G
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RNA, Messenger
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RNA, Ribosomal, 16S
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RNA, Transfer
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TrmD protein, E coli
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tRNA Methyltransferases