The cyanobacterium Prochlorococcus has divergent light-harvesting antennae and may have evolved in a low-oxygen ocean

Proc Natl Acad Sci U S A. 2021 Mar 16;118(11):e2025638118. doi: 10.1073/pnas.2025638118.

Abstract

Marine picocyanobacteria of the genus Prochlorococcus are the most abundant photosynthetic organisms in the modern ocean, where they exert a profound influence on elemental cycling and energy flow. The use of transmembrane chlorophyll complexes instead of phycobilisomes as light-harvesting antennae is considered a defining attribute of Prochlorococcus Its ecology and evolution are understood in terms of light, temperature, and nutrients. Here, we report single-cell genomic information on previously uncharacterized phylogenetic lineages of this genus from nutrient-rich anoxic waters of the eastern tropical North and South Pacific Ocean. The most basal lineages exhibit optical and genotypic properties of phycobilisome-containing cyanobacteria, indicating that the characteristic light-harvesting antenna of the group is not an ancestral attribute. Additionally, we found that all the indigenous lineages analyzed encode genes for pigment biosynthesis under oxygen-limited conditions, a trait shared with other freshwater and coastal marine cyanobacteria. Our findings thus suggest that Prochlorococcus diverged from other cyanobacteria under low-oxygen conditions before transitioning from phycobilisomes to transmembrane chlorophyll complexes and may have contributed to the oxidation of the ancient ocean.

Keywords: anoxia; cyanobacteria; genomics; microbiology; oceanography.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Chlorophyll / genetics
  • Cyanobacteria / classification
  • Cyanobacteria / genetics
  • Evolution, Molecular
  • Genes, Bacterial / genetics
  • Genome, Bacterial / genetics
  • Light-Harvesting Protein Complexes / genetics*
  • Nutrients / analysis
  • Oxygen / analysis*
  • Pacific Ocean
  • Phycobilisomes / genetics
  • Phylogeny
  • Pigments, Biological / genetics
  • Prochlorococcus / classification
  • Prochlorococcus / genetics*
  • Seawater / chemistry
  • Seawater / microbiology*

Substances

  • Light-Harvesting Protein Complexes
  • Phycobilisomes
  • Pigments, Biological
  • Chlorophyll
  • Oxygen