Development of a High-Affinity Antibody-Binding Peptide for Site-Specific Modification

ChemMedChem. 2021 Jun 7;16(11):1813-1820. doi: 10.1002/cmdc.202000977. Epub 2021 Mar 25.

Abstract

Immunoglobulin G (IgG)-binding peptides such as 15-IgBP are convenient tools for the site-specific modification of antibodies and the preparation of homogeneous antibody-drug conjugates. A peptide such as 15-IgBP can be selectively crosslinked to the fragment crystallizable region of human IgG in an affinity-dependent manner via the ϵ-amino group of Lys8. Previously, we found that the peptide 15-Lys8Leu has a high affinity (Kd =8.19 nM) due to the presence of the γ-dimethyl group in Leu8. The primary amino group required for the crosslinking to the antibodies has, however, been lost. Here, we report the design and synthesis of a novel unnatural amino acid, 4-(2-aminoethylcarbamoyl)leucine (Aecl), which possesses both the γ-dimethyl fragment and a primary amino group. A peptide containing Aecl8 (15-Lys8Aecl) was synthesized and showed a binding affinity ten times higher (Kd =24.3 nM) than that of 15-IgBP (Kd =267 nM). Fluorescein isothiocyanate (FITC)-labeled 15-Lys8Aecl with an N-hydroxy succinimide ester at the side chain of Aecl8 (FITC-15-Lys8Aecl(OSu)) successfully labeled an antibody (trastuzumab, Herceptin® ) with the fluorophore. This peptide scaffold has both strong binding affinity and crosslinking capability, and could be a useful tool for the selective chemical modification of antibodies with molecules of interest such as drugs.

Keywords: IgG-binding peptide; antibody-drug conjugate; bioconjugation; structure activity relationship; unnatural amino acid.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Drug Development*
  • Humans
  • Immunoconjugates / chemistry*
  • Immunoglobulin G / chemistry*
  • Leucine / analogs & derivatives
  • Leucine / chemistry
  • Molecular Structure
  • Peptides / chemistry*

Substances

  • Immunoconjugates
  • Immunoglobulin G
  • Peptides
  • Leucine