Pontin arginine methylation by CARM1 is crucial for epigenetic regulation of autophagy

Nat Commun. 2020 Dec 8;11(1):6297. doi: 10.1038/s41467-020-20080-9.

Abstract

Autophagy is a catabolic process through which cytoplasmic components are degraded and recycled in response to various stresses including starvation. Recently, transcriptional and epigenetic regulations of autophagy have emerged as essential mechanisms for maintaining homeostasis. Here, we identify that coactivator-associated arginine methyltransferase 1 (CARM1) methylates Pontin chromatin-remodeling factor under glucose starvation, and methylated Pontin binds Forkhead Box O 3a (FOXO3a). Genome-wide analyses and biochemical studies reveal that methylated Pontin functions as a platform for recruiting Tip60 histone acetyltransferase with increased H4 acetylation and subsequent activation of autophagy genes regulated by FOXO3a. Surprisingly, CARM1-Pontin-FOXO3a signaling axis can work in the distal regions and activate autophagy genes through enhancer activation. Together, our findings provide a signaling axis of CARM1-Pontin-FOXO3a and further expand the role of CARM1 in nuclear regulation of autophagy.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATPases Associated with Diverse Cellular Activities / genetics
  • ATPases Associated with Diverse Cellular Activities / metabolism*
  • Acetylation
  • Animals
  • Arginine / metabolism
  • Autophagy / genetics*
  • DNA Helicases / genetics
  • DNA Helicases / metabolism*
  • Epigenesis, Genetic*
  • Fibroblasts
  • Forkhead Box Protein O3 / metabolism
  • Gene Knockdown Techniques
  • Gene Knockout Techniques
  • Glucose / metabolism
  • HEK293 Cells
  • HeLa Cells
  • Hep G2 Cells
  • Histones / metabolism
  • Humans
  • Lysine Acetyltransferase 5 / metabolism
  • Methylation
  • Mice, Transgenic
  • Protein Processing, Post-Translational
  • Protein-Arginine N-Methyltransferases / genetics
  • Protein-Arginine N-Methyltransferases / metabolism*
  • Signal Transduction / genetics
  • Trans-Activators / metabolism
  • Transcriptional Activation

Substances

  • Forkhead Box Protein O3
  • FoxO3 protein, mouse
  • Histones
  • Trans-Activators
  • Arginine
  • Protein-Arginine N-Methyltransferases
  • coactivator-associated arginine methyltransferase 1
  • Kat5 protein, mouse
  • Lysine Acetyltransferase 5
  • ATPases Associated with Diverse Cellular Activities
  • DNA Helicases
  • RUVBL1 protein, mouse
  • Glucose