Effects of cold plasma on wheat grain microbiome and antimicrobial efficacy against challenge pathogens and their resistance

Int J Food Microbiol. 2020 Dec 16:335:108889. doi: 10.1016/j.ijfoodmicro.2020.108889. Epub 2020 Sep 11.

Abstract

The safety and quality of cereal grain supplies are adversely impacted by microbiological contamination, with novel interventions required to maximise whole grains safety and stability. The microbiological contaminants of wheat grains and the efficacy of Atmospheric Cold Plasma (ACP) for potential to control these risks were investigated. The evaluations were performed using a contained reactor dielectric barrier discharge (DBD) system; samples were treated for 0-20 min using direct and indirect plasma exposure. Amplicon-based metagenomic analysis using bacterial 16S rRNA gene and fungal 18S rRNA gene with internal transcribed spacer (ITS) region was performed to characterize the change in microbial community composition in response to ACP treatment. The antimicrobial efficacy of ACP against a range of bacterial and fungal contaminants of wheat, was assessed to include individual isolates from grains as challenge pathogens. ACP influenced wheat microbiome composition, with a higher microbial diversity as well as abundance found on the untreated control grain samples. Culture and genomic approaches revealed different trends for mycoflora detection and control. A challenge study demonstrated that using direct mode of plasma exposure with 20 min of treatment significantly reduced the concentration of all pathogens. Overall, reduction levels for B. atrophaeus vegetative cells were higher than for all fungal species tested, whereas B. atrophaeus spores were the most resistant to ACP among all microorganisms tested. Of note, repeating sub-lethal plasma treatment did not induce resistance to ACP in either B. atrophaeus or A. flavus spores. ACP process control could be tailored to address diverse microbiological risks for grain stability and safety.

Keywords: Antimicrobial efficacy; Atmospheric cold plasma; Bacterial sporulation; High throughput sequencing; Microbial resistance; Wheat grains microbiome.

MeSH terms

  • Anti-Infective Agents / pharmacology*
  • Bacteria / classification
  • Bacteria / drug effects
  • Bacteria / genetics
  • Bacteria / isolation & purification
  • Drug Resistance, Microbial*
  • Edible Grain / microbiology
  • Fungi / classification
  • Fungi / drug effects
  • Fungi / genetics
  • Fungi / isolation & purification
  • Microbiota / drug effects*
  • Plasma Gases / pharmacology*
  • RNA, Ribosomal / genetics
  • Species Specificity
  • Triticum / microbiology*

Substances

  • Anti-Infective Agents
  • Plasma Gases
  • RNA, Ribosomal