Mutational burden and potential oligogenic model of TBX6-mediated genes in congenital scoliosis

Mol Genet Genomic Med. 2020 Oct;8(10):e1453. doi: 10.1002/mgg3.1453. Epub 2020 Aug 20.

Abstract

Background: Congenital scoliosis (CS) is a spinal deformity due to vertebral malformations. Although insufficiency of TBX6 dosage contributes to a substantial proportion of CS, the molecular etiology for the majority of CS remains largely unknown. TBX6-mediated genes involved in the process of somitogenesis represent promising candidates.

Methods: Individuals affected with CS and without a positive genetic finding were referred to this study. Proband-only exome sequencing (ES) were performed on the recruited individuals, followed by analysis of TBX6-mediated candidate genes, namely MEOX1, MEOX2, MESP2, MYOD1, MYF5, RIPPLY1, and RIPPLY2.

Results: A total of 584 patients with CS of unknown molecular etiology were recruited. After ES analysis, protein-truncating variants in RIPPLY1 and MYF5 were identified from two individuals, respectively. In addition, we identified five deleterious missense variants (MYOD1, n = 4; RIPPLY2, n = 1) in TBX6-mediated genes. We observed a significant mutational burden of MYOD1 in CS (p = 0.032) compared with the in-house controls (n = 1854). Moreover, a potential oligogenic disease-causing mode was proposed based on the observed mutational co-existence of MYOD1/MEOX1 and MYOD1/RIPPLY1.

Conclusion: Our study characterized the mutational spectrum of TBX6-mediated genes, prioritized core candidate genes/variants, and provided insight into a potential oligogenic disease-causing mode in CS.

Keywords: TBX6-mediated genes; congenital scoliosis; exome sequencing; mutational burden.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Gene Frequency*
  • Genetic Loci*
  • Homeodomain Proteins / genetics
  • Humans
  • Multifactorial Inheritance*
  • Mutation, Missense
  • MyoD Protein / genetics
  • Myogenic Regulatory Factor 5 / genetics
  • Repressor Proteins / genetics
  • Scoliosis / diagnostic imaging
  • Scoliosis / genetics*
  • T-Box Domain Proteins / genetics*
  • Transcription Factors / genetics

Substances

  • Homeodomain Proteins
  • MEOX1 protein, human
  • MYF5 protein, human
  • MyoD Protein
  • MyoD1 myogenic differentiation protein
  • Myogenic Regulatory Factor 5
  • RIPPLY1 protein, human
  • Repressor Proteins
  • T-Box Domain Proteins
  • TBX6 protein, human
  • Transcription Factors