Analysis of Lifespan in C. elegans: Low- and High-Throughput Approaches

Methods Mol Biol. 2020:2144:7-27. doi: 10.1007/978-1-0716-0592-9_2.

Abstract

Lifespan is the most straightforward surrogate measure of aging, as it is easily quantifiable. A common approach to measure Caenorhabditis elegans lifespan is to follow a population of animals over time and score viability based on movement. We previously developed an alternative approach, called the Replica Set method, to quantitatively measure lifespan of C. elegans in a high-throughput manner. The replica set method allows a single investigator to screen more treatments or conditions in the same amount of time without loss of data quality. The method requires common equipment found in most laboratories working with C. elegans and is thus simple to adopt. Unlike traditional approaches, the Replica Set method centers on assaying independent samples of a population at each observation point, rather than a single sample over time as with "traditional" longitudinal methods. The protocols provided here describe both the traditional experimental approach and the Replica Set method, as well as practical considerations for each.

Keywords: Aging; C. elegans; High-throughput; Kaplan–Meier; Lifespan; Logistic regression; Statistical analysis of quantitative phenotypes; Survival analysis.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Aging / genetics*
  • Animals
  • Biological Assay / methods*
  • Caenorhabditis elegans / genetics*
  • Caenorhabditis elegans / growth & development
  • Longevity / genetics*