Accumulation of unacetylatable Snf2p at the INO1 promoter is detrimental to remodeler recycling supply for CUP1 induction

PLoS One. 2020 Mar 25;15(3):e0230572. doi: 10.1371/journal.pone.0230572. eCollection 2020.

Abstract

Chromatin structure plays a decisive role in gene regulation through the actions of transcriptional activators, coactivators, and epigenetic machinery. These trans-acting factors contribute to gene expression through their interactions with chromatin structure. In yeast INO1 activation, transcriptional activators and coactivators have been defined through intense study but the mechanistic links within these trans-acting factors and their functional implications are not yet fully understood. In this study, we examined the crosstalk within transcriptional coactivators with regard to the implications of Snf2p acetylation during INO1 activation. Through various biochemical analysis, we demonstrated that both Snf2p and Ino80p chromatin remodelers accumulate at the INO1 promoter in the absence of Snf2p acetylation during induction. Furthermore, nucleosome density and histone acetylation patterns remained unaffected by Snf2p acetylation status. We also showed that cells experience increased sensitivity to copper toxicity when remodelers accumulate at the INO1 promoter due to the decreased CUP1 expression. Therefore, our data provide evidence for crosstalk within transcriptional co-activators during INO1 activation. In light of these findings, we propose a model in which acetylation-driven chromatin remodeler recycling allows for efficient regulation of genes that are dependent upon limited co-activators.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Acetylation
  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / metabolism*
  • Cell Survival / drug effects
  • Chromatin / metabolism
  • Chromatin Assembly and Disassembly
  • Copper / metabolism
  • Copper / toxicity
  • Histones / metabolism
  • Metallothionein / genetics
  • Metallothionein / metabolism*
  • Myo-Inositol-1-Phosphate Synthase / genetics*
  • Myo-Inositol-1-Phosphate Synthase / metabolism
  • Nucleosomes / metabolism
  • Promoter Regions, Genetic
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / genetics*
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*
  • Transcriptional Activation

Substances

  • CUP1-1 protein, S cerevisiae
  • Chromatin
  • Histones
  • INO80 complex, S cerevisiae
  • Nucleosomes
  • Saccharomyces cerevisiae Proteins
  • Transcription Factors
  • Copper
  • Metallothionein
  • Adenosine Triphosphatases
  • SNF2 protein, S cerevisiae
  • INO1 protein, S cerevisiae
  • Myo-Inositol-1-Phosphate Synthase

Grants and funding

We would like to declare that CHS received funding from North Atlantic Treaty Organization (NATO) SPS G5266, National Science Foundation (NSF) MCB 0919218, Professional Staff Congress-City University of New York (PSC-CUNY) awards for this research. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.