The structure of the endogenous ESX-3 secretion system

Elife. 2019 Dec 30:8:e52983. doi: 10.7554/eLife.52983.

Abstract

The ESX (or Type VII) secretion systems are protein export systems in mycobacteria and many Gram-positive bacteria that mediate a broad range of functions including virulence, conjugation, and metabolic regulation. These systems translocate folded dimers of WXG100-superfamily protein substrates across the cytoplasmic membrane. We report the cryo-electron microscopy structure of an ESX-3 system, purified using an epitope tag inserted with recombineering into the chromosome of the model organism Mycobacterium smegmatis. The structure reveals a stacked architecture that extends above and below the inner membrane of the bacterium. The ESX-3 protomer complex is assembled from a single copy of the EccB3, EccC3, and EccE3 and two copies of the EccD3 protein. In the structure, the protomers form a stable dimer that is consistent with assembly into a larger oligomer. The ESX-3 structure provides a framework for further study of these important bacterial transporters.

Keywords: ESX; cryo EM; endogenous purification; molecular biophysics; mycobacteria; pathogenesis; secretion system; structural biology.

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / ultrastructure
  • Chromosomes / chemistry
  • Chromosomes / genetics
  • Epitopes / chemistry
  • Epitopes / genetics
  • Mycobacterium smegmatis / chemistry*
  • Mycobacterium smegmatis / ultrastructure
  • Operon / genetics
  • Protein Transport / genetics*
  • Type VII Secretion Systems / chemistry*
  • Type VII Secretion Systems / genetics
  • Type VII Secretion Systems / ultrastructure

Substances

  • Bacterial Proteins
  • Epitopes
  • Type VII Secretion Systems

Associated data

  • PDB/6UMM