FAIR adoption, assessment and challenges at UniProt

Leyla Garcia; Jerven Bolleman; Sebastien Gehant; Nicole Redaschi; Maria Martin; UniProt Consortium

doi:10.1038/s41597-019-0180-9

FAIR adoption, assessment and challenges at UniProt

Sci Data. 2019 Sep 20;6(1):175. doi: 10.1038/s41597-019-0180-9.

Authors

Leyla Garcia¹, Jerven Bolleman², Sebastien Gehant², Nicole Redaschi², Maria Martin³; UniProt Consortium

Collaborators

UniProt Consortium:
Alex Bateman, Michele Magrane, Maria Martin, Sandra Orchard, Shriya Raj, Shadab Ahmad, Emanuele Alpi, Emily Bowler, Ramona Britto, Borisas Bursteinas, Hema Bye-A-Jee, Tunca Dogan, Leyla Garcia, Penelope Garmiri, George Georghiou, Leonardo Gonzales, Emma Hatton-Ellis, Alexandr Ignatchenko, Giuseppe Insana, Rizwan Ishtiaq, Vishal Joshi, Dushyanth Jyothi, Jie Luo, Yvonne Lussi, Alistair MacDougall, Mahdi Mahmoudy, Andrew Nightingale, Carla Oliveira, Joseph Onwubiko, Vivek Poddar, Sangya Pundir, Guoying Qi, Ahmet Rifaioglu, Daniel Rice, Rabie Saidi, Elena Speretta, Edward Turner, Nidhi Tyagi, Preethi Vasudev, Vladimir Volynkin, Kate Warner, Xavier Watkins, Rossana Zaru, Hermann Zellner, Alan Bridge, Lionel Breuza, Elisabeth Coudert, Damien Lieberherr, Ivo Pedruzzi, Sylvain Poux, Manuela Pruess, Nicole Redaschi, Lucila Aimo, Ghislaine Argoud-Puy, Andrea Auchincloss, Kristian Axelsen, Parit Bansal, Delphine Baratin, Teresa Batista Neto, Marie-Claude Blatter, Jerven Bolleman, Emmanuel Boutet, Cristina Casals-Casas, Beatrice Cuche, Edouard De Castro, Anne Estreicher, Livia Famiglietti, Marc Feuermann, Elisabeth Gasteiger, Sebastien Gehant, Vivienne Gerritsen, Arnaud Gos, Nadine Gruaz, Ursula Hinz, Chantal Hulo, Nevila Hyka-Nouspikel, Florence Jungo, Arnaud Kerhornou, Philippe Lemercier, Thierry Lombardot, Patrick Masson, Anne Morgat, Sandrine Pilbout, Monica Pozzato, Catherine Rivoire, Christian Sigrist, Shyamala Sundaram, Cathy Wu, Cecilia Arighi, Hongzhan Huang, Peter McGarvey, Darren Natale, Leslie Arminski, Chuming Chen, Yongxing Chen, John Garavelli, Kati Laiho, Karen Ross, C R Vinayaka, Qinghua Wang, Yuki Wang, Lai-Su Yeh, Jian Zhang

Affiliations

¹ European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK. ljgarcia@ebi.ac.uk.
² SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, 1 rue Michel Servet, 1211, Geneva 4, Switzerland.
³ European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK.

Abstract

UniProt continues to support the ongoing process of making scientific data FAIR. Here we contribute to this process with a FAIRness assessment of our UniProtKB dataset followed by a critical reflection on the challenges and future directions of the adoption and validation of the FAIR principles and metrics.

Publication types

Research Support, Non-U.S. Gov't
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.

Abstract

Publication types

Grants and funding