The genetic incorporation of p-azidomethyl-l-phenylalanine into proteins in yeast

Bioorg Med Chem Lett. 2018 May 15;28(9):1570-1573. doi: 10.1016/j.bmcl.2018.03.055. Epub 2018 Mar 22.

Abstract

The noncanonical amino acid p-azidomethyl-l-phenylalanine can be genetically incorporated into proteins in bacteria, and has been used both as a spectroscopic probe and for the selective modification of proteins by alkynes using click chemistry. Here we report identification of Escherichia coli tyrosyl tRNA synthetase mutants that allow incorporation of p-azidomethyl-l-phenylalanine into proteins in yeast. When expressed together with the cognate E. coli tRNACUATyr, the new mutant tyrosyl tRNA synthetases directed robust incorporation of p-azidomethyl-l-phenylalanine into a model protein, human superoxide dismutase, in response to the UAG amber nonsense codon. Mass spectrometry analysis of purified superoxide dismutase proteins confirmed the efficient site-specific incorporation of p-azidomethyl-l-phenylalanine. This work provides an additional tool for the selective modification of proteins in eukaryotic cells.

Keywords: Aminoacyl-tRNA synthetase; Mutant; Noncanonical amino acids; Protein expression; Yeast.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Dose-Response Relationship, Drug
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics*
  • Humans
  • Molecular Structure
  • Mutation
  • Phenylalanine / analogs & derivatives*
  • Phenylalanine / chemistry
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / chemistry*
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Structure-Activity Relationship
  • Superoxide Dismutase / chemistry
  • Superoxide Dismutase / genetics
  • Superoxide Dismutase / metabolism
  • Tyrosine-tRNA Ligase / chemistry
  • Tyrosine-tRNA Ligase / genetics*
  • Tyrosine-tRNA Ligase / metabolism*

Substances

  • Saccharomyces cerevisiae Proteins
  • p-azidomethyl-L-phenylalanine
  • Phenylalanine
  • Superoxide Dismutase
  • Tyrosine-tRNA Ligase